Pairwise Alignments

Query, 420 a.a., ABC-type antimicrobial peptide transport system, permease component from Variovorax sp. SCN45

Subject, 421 a.a., ABC-type transport system, involved in lipoprotein release, permease component from Pseudomonas stutzeri RCH2

 Score =  432 bits (1112), Expect = e-126
 Identities = 223/419 (53%), Positives = 291/419 (69%), Gaps = 2/419 (0%)

Query: 4   LFSIAWRSAWNRRFTLALTVFSIALSTFLLLGVERIRTELRENFASSVSGTDLIVGARTG 63
           L  +A  S  NRRFT  LTVF+IALS  LLL VER+R E R +FA+++SGTDL+VGAR+G
Sbjct: 3   LLRLALASLNNRRFTALLTVFAIALSVCLLLAVERVRNETRASFANTISGTDLVVGARSG 62

Query: 64  STQLLLYSVFRIGAATNNISWKSVQALEAHPGVDWVVPLSLGDSHRGFAVLATSPEYFTR 123
           S  LLLYSVFRIG ATNNI W S Q    HP VDW +P+SLGDSHRG+ V+ TS  YF  
Sbjct: 63  SVNLLLYSVFRIGNATNNIRWDSYQRFAEHPRVDWAIPISLGDSHRGYRVMGTSTNYFEH 122

Query: 124 FRYGDRQLLKMREGKPF-SELFDAVVGAEVADKLGYHVGQKITLAHGSGELNVAEHADKP 182
           +RYG +Q L++ EG+ F S+ F+ V+GAEVA  LGY +   I LAHG   +++ +H DKP
Sbjct: 123 YRYGRKQPLQLAEGRAFESDPFEVVLGAEVASALGYQLDDSIVLAHGVARVSLVQHEDKP 182

Query: 183 FTVVGVLARTGTPVDRTVHIGLPAMEAIHLEWVGGAPMPGV-HIPAEQVRKFDLTPKNVT 241
           F VVGVL RTGTPVDRT+HI L  MEA+H++W  G P  G   I AEQ R+ DL P+ +T
Sbjct: 183 FRVVGVLQRTGTPVDRTLHISLEGMEALHVDWQNGMPARGAARIDAEQARQLDLQPQQIT 242

Query: 242 AALVGLKNRAAVFGVQRWISTYTGEPLMAILPGVALDELWSVIGIGENALLLMSALVALV 301
           A L+GL ++ A F +QR I+ Y GEPL+AILPGVAL ELWS++G  E AL ++S  V L 
Sbjct: 243 AFLLGLNSKIATFTLQREINEYRGEPLLAILPGVALQELWSLMGTAEKALFVVSLFVVLT 302

Query: 302 SLAGLVSVVMAGLNERRRELAVLRAVGAGLRHVLALLALEGAMVTVLGVAFGVVMAVLGI 361
            L G+++ ++  LNERRRE+A+LR+VGA   H+ ALL +E   + + G   G+ +  LGI
Sbjct: 303 GLIGMLTAILTSLNERRREMAILRSVGARPWHIAALLIIEAFGLALAGTLLGLALLYLGI 362

Query: 362 ALLSPWLQAQFGLTLSLSEPTLNEWLLMASLLVAGWLASLLPGIRAYRLSLADGLSPRI 420
           A+    LQ+ +GL L L+ P+  EW L+ ++L+A  L   +P  RAYR SLADGLS R+
Sbjct: 363 AVAQSPLQSLYGLYLPLAWPSSYEWSLLGAILLAALLMGSVPAWRAYRQSLADGLSIRL 421