Pairwise Alignments

Query, 420 a.a., ABC-type antimicrobial peptide transport system, permease component from Variovorax sp. SCN45

Subject, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  427 bits (1098), Expect = e-124
 Identities = 207/420 (49%), Positives = 297/420 (70%), Gaps = 1/420 (0%)

Query: 1   MKALFSIAWRSAWNRRFTLALTVFSIALSTFLLLGVERIRTELRENFASSVSGTDLIVGA 60
           MK + ++AW+S  NR+ T  LTV ++A++  LLLGVERIRT+ +E+FA+++SGTDLIVG 
Sbjct: 1   MKVILNLAWKSLLNRKATALLTVLTVAIAVVLLLGVERIRTQAKESFANTISGTDLIVGG 60

Query: 61  RTGSTQLLLYSVFRIGAATNNISWKSVQALEAHPGVDWVVPLSLGDSHRGFAVLATSPEY 120
           R+G   LLLYSVFRIG ATNNI WKS Q    HP V W +P+SLGDSH+GF VL T+  Y
Sbjct: 61  RSGQVNLLLYSVFRIGNATNNIDWKSYQEFSQHPAVKWAIPISLGDSHKGFRVLGTNHSY 120

Query: 121 FTRFRYGDRQLLKMREGKPFSELFDAVVGAEVADKLGYHVGQKITLAHGSGELNVAEHAD 180
           F  +RYG +Q L + +G+ F+ LF+ V+GA+VA  LGY VG +I +AHG  ++  + H +
Sbjct: 121 FEHYRYGSKQPLTLSQGREFNGLFETVIGADVAQALGYQVGSQIIIAHGISDVGFSRHDN 180

Query: 181 KPFTVVGVLARTGTPVDRTVHIGLPAMEAIHLEWVGGAPMPGVHIPAEQVRKFDLTPKNV 240
            PFTVVG+LA TGTPVD+TVH+ L A+EAIH+ W  GA + G    AEQ+ + D TPK +
Sbjct: 181 LPFTVVGILAPTGTPVDKTVHVSLEAIEAIHVGWESGANL-GHQPSAEQLAQRDFTPKQI 239

Query: 241 TAALVGLKNRAAVFGVQRWISTYTGEPLMAILPGVALDELWSVIGIGENALLLMSALVAL 300
           TA LVGLK++   F +QR I+ Y  EPL AI+PGVAL ELW ++ + E AL+ +S  V +
Sbjct: 240 TAMLVGLKSKIQTFALQRQINDYPQEPLSAIMPGVALHELWGMMSVAEQALMAVSVFVVV 299

Query: 301 VSLAGLVSVVMAGLNERRRELAVLRAVGAGLRHVLALLALEGAMVTVLGVAFGVVMAVLG 360
             L G++S ++  L ERRRE+++LRA+GA  +HV ALL  E +++T++G+  GV +  L 
Sbjct: 300 AGLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEASVLTLVGILLGVSVLYLL 359

Query: 361 IALLSPWLQAQFGLTLSLSEPTLNEWLLMASLLVAGWLASLLPGIRAYRLSLADGLSPRI 420
           +AL +P + +Q+G+ ++L+  T  EW L+  + +AG +   +P +RAYR SL+DG++ R+
Sbjct: 360 LALAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGIVIGFIPALRAYRQSLSDGMTIRL 419