Pairwise Alignments

Query, 422 a.a., Glutamate carboxypeptidase (EC 3.4.17.11) from Variovorax sp. SCN45

Subject, 381 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella sp. ANA-3

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 80/308 (25%), Positives = 130/308 (42%), Gaps = 29/308 (9%)

Query: 114 GHMDTVYPAGILNG------QPYKVDGNRIYGPGIADDKGGLAVIMASLKILADAGWRDY 167
           GH D V PAG L+       +P  +DG  +YG G AD KG LA ++ + +          
Sbjct: 71  GHTDVV-PAGDLSRWHTPPFEPTIIDGY-LYGRGAADMKGSLAAMIVATERFVAKHPNHP 128

Query: 168 DTLTVVMNPDEEVGSV-GSGELIATLADQHDTV---LSFEPTAAKSVAKGESLLLGAAGI 223
            ++  ++  DEE   + G+  +I TL  +++ +   L  EP++  ++  G+ +  G  G 
Sbjct: 129 GSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWTLVGEPSS--TLKLGDVVKNGRRGS 186

Query: 224 ATATLEVKGRAAHAGAAPELGRNALYELSYQMLQTKDVAKD-----IPGVTLN-WTVARA 277
            TA L VKG   H  A P L  N +++ +  + +      D      P  ++    +   
Sbjct: 187 LTANLTVKGIQGHV-AYPHLADNPIHKAAPFLAELSQTHWDNGNEFFPPTSMQIANINGG 245

Query: 278 TGPLNQITEKAQAQGDIRITQPGAEKKLNEALQAKIATGKLIPDTETTVKVEVGRPAFIA 337
           TG  N I    +   + R +     + L E ++A +   +L  D   T     G P F+ 
Sbjct: 246 TGASNVIPGTLEVMFNFRYSTEVTAEILIERVEALLTAHELDYDISWTFN---GLP-FLT 301

Query: 338 GEKGRALAEKAQAIYKELDRDLALTPMTGGGTDAGYAGRSGKAAVVESFGLAGFGYHARD 397
           GE G  L     AI +    D    P T GGT  G       A V+E  G      H  +
Sbjct: 302 GE-GPLLDATRHAIRQITGYD--TDPQTTGGTSDGRFIAPTGAKVLE-LGPVNATIHKVN 357

Query: 398 EYIEVDSI 405
           E +++D +
Sbjct: 358 ECVKIDDL 365