Pairwise Alignments

Query, 529 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  104 bits (259), Expect = 1e-26
 Identities = 129/496 (26%), Positives = 212/496 (42%), Gaps = 70/496 (14%)

Query: 29  TPPKTLKVVAHADLKILDPTFTTAYISRNFGYMVYDTLFAQDSSGKPQPQMVEKYTTSKD 88
           T P  L ++AH+            YIS        ++L + D    PQP +  ++T S+D
Sbjct: 54  TEPPVLVLIAHS-------AGAAYYISGK----ATESLLSYDKDFNPQPLLATEWTVSED 102

Query: 89  GKQWTFTLRPNLKFSDGSAVTAADAVASLQRWAARDSLGRAMTAVGAEWKATDARTLTLT 148
           G ++ F LR ++++ DG   TA     S+         GRA  A   E    ++  + LT
Sbjct: 103 GLRYWFKLRQDVRWHDGRDFTAEAVAFSILALKENHPRGRATFAHVKEANVLNSHEVELT 162

Query: 149 LNEPFGMVLDALAKPSGFPPVILPERLAKMPASAPLPE---VLGSGPFIFKRDEWVPGNK 205
           L +P   +L A A    F   I+P+ L +    A  P     +G+GP+ F   EWV G+ 
Sbjct: 163 LAKPAPYLLTAFA---SFEAPIVPKHLYEGTKIAENPHNVAPVGTGPYKFV--EWVRGSH 217

Query: 206 TVFVRNPNYVPRSEPSNGLAGSKKSNFERVEWLYLPDANSAVSALKRGEVDF-IEQLPPD 264
            +FVRN +Y           GS K   +++ + ++ D  +AV+A++ GEV      LP  
Sbjct: 218 ALFVRNEDY----------WGSPKPYLDQIIFRFIVDPAAAVAAIETGEVQVSTANLPLT 267

Query: 265 YIAPLRTDSNVKIGSGGA-YQAFLV---MNQLHPPFDNPKVRQALLQAVNQERFM----A 316
            I  L+ + N+ + +  A Y   +     N  +    + KVR A+  AV+++  +     
Sbjct: 268 DIDRLKANPNLVVDTDPAPYSPSIARAEFNLENKYLADIKVRHAIAHAVDKDFIVNTVYL 327

Query: 317 GMGFPLDMRMAYCATYFICGSPNDTSAGAEPYRKADVAKAKKMLADAGY----KGEKVVL 372
           G    LD  ++     F   SP+       P  + D AK++K+L +AGY     G +  L
Sbjct: 328 GYATRLDGPVSPDLAKFY--SPD------LPKYEFDPAKSEKLLDEAGYARGADGFRFKL 379

Query: 373 MV----PSDVPYLNAEALMAAQTMKSIGLNVDAQTMDWASIGARRAKRDAGDAGGWNMYV 428
            +    PS  P   AE +  AQ +  +G+ V+ +T D+A+   +R   D       +  +
Sbjct: 380 FIDPTQPSGPPKQTAEYI--AQALAKVGIKVELRTQDFATF-VKRVFTDR------DFDI 430

Query: 429 TVAGEFDANSPIANAYLGAACGNTLPGWP-------CDKPLDELRTAWLKETVPAKRKEL 481
            + G  +   P           N  PG P        +  +D L      E  P KR EL
Sbjct: 431 AIEGMSNLYDPTVGVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLETAAVEIDPKKRLEL 490

Query: 482 LDAFQARAYEAVPYIN 497
            + FQ    E +P ++
Sbjct: 491 FNEFQKLVVEDLPTLD 506