Pairwise Alignments

Query, 529 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  145 bits (365), Expect = 5e-39
 Identities = 150/532 (28%), Positives = 228/532 (42%), Gaps = 56/532 (10%)

Query: 5   RTLAAFAALALSGAFAASLPALAQTPPKTLKVVAHADLKILDPTFTTAYISRNFGYMVYD 64
           R+  A AALA +GA AA  PA AQTPP  L V   A+ + LDP   TA         VYD
Sbjct: 6   RSAIALAALAFAGAAAA--PAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRILVNVYD 63

Query: 65  TLFA-QDSSGKPQPQMVEKYTTSKDGKQWTFTLRPNLKFSDGSAVTAADAVASLQRWAAR 123
            L   +D + + +P + E +  S DGK +TFTLR  +KF DGS   A     +  R   +
Sbjct: 64  GLVRFKDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKK 123

Query: 124 D---------SLGRAMTAVGAEWKATDARTLTLTLNEPFGMVLDALAKPSGF--PPVILP 172
           D          L     +V A     D  T+   L+E F   L  LA P+G    PV + 
Sbjct: 124 DHPFYDTGPFPLSFNFASVKAV-NVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAV- 181

Query: 173 ERLAKMPASAPLPEVLGSGPFIFKRDEWVPGNKTVFVRNPNYVPRSEPSNGLAGSKKSNF 232
           E+  K    +P     G+GPF F   EW+   + V  RNP+Y               +  
Sbjct: 182 EKHGKEYGRSP----SGTGPFKFV--EWLSNQRVVVERNPDY-----------WDSAAKL 224

Query: 233 ERVEWLYLPDANSAVSALKRGEVDFIEQLPPDYIAPLRTDSNVKIG-SGGAYQAFLVMNQ 291
           + V +  + DAN+ V+ +  G +D + ++PPD +A    D+N  +    G +  F ++N 
Sbjct: 225 QAVVFRPITDANTRVAEMMAGGIDVMVEVPPDNLATFEQDANFAVAEQAGPHVWFTILNT 284

Query: 292 LHPPFDNPKVRQALLQAVNQERFMAGMGFPLDMR-MAYCATYFICGSPNDTSAGAEPYRK 350
              PF + +VRQA   AVN++  +  +     +R  A  A   I  + N   +  EPY  
Sbjct: 285 KQGPFADKRVRQAANYAVNKQTLVDDV-----LRGTATVAAGPIPPAFNWVESSVEPYAH 339

Query: 351 ADVAKAKKMLADAGYKGEKVVLMVPSDVPYLNAEALMAA---QTMKSIGLNVDAQTMDWA 407
            D  KAK +LA+AG +  +V   V      +     M A     ++++G  V  +T +W 
Sbjct: 340 -DPEKAKALLAEAGVENPQVTFYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWN 398

Query: 408 SIGARRAKRDAGDAGGWNMYVTVAGEFDANSPIANAYLGAAC------GNTLPGWPCDKP 461
           +   R      G A    M       +  N P    YL          G    G+  +  
Sbjct: 399 TFLGRVNPGLEGKADMAEM------AWMTNDPDTVPYLTLRTDAMPDKGGFNSGYYSNPQ 452

Query: 462 LDELRTAWLKETVPAKRKELLDAFQARAYEAVPYINAGQYSAAYAARSSLKG 513
           LDEL     + T  A+R +L    Q+  ++  P++    +       +++KG
Sbjct: 453 LDELLEKARRSTDQAERGKLYGEVQSIVHDDAPWLFVANWKQNAVTTAAVKG 504