Pairwise Alignments

Query, 529 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 540 a.a., putative ABC transport system periplasmic binding protein from Klebsiella michiganensis M5al

 Score = 94.7 bits (234), Expect = 8e-24
 Identities = 120/445 (26%), Positives = 192/445 (43%), Gaps = 60/445 (13%)

Query: 2   MQRRTLAAFAALALSGAFAASLPALAQTPPKTLKVVAHAD-LKILDPTFTTAYISRNFGY 60
           M++ +L A   LAL+ +  +   ALA+TPP  L +  + + L  LDP   T         
Sbjct: 1   MKKNSLLAACLLALAVSMGSGA-ALAKTPPDQLIIGMNMNNLLTLDPAAMTGNEVVGIVV 59

Query: 61  MVYDTLFAQDSSG--KPQPQMVEKYTTSKDGKQWTFTLRPNLKFSDGSAVTAADAVASLQ 118
            +YD+L   D       +P + + +  S DGK  TF LR ++KF  G+ +TAAD V S++
Sbjct: 60  NLYDSLVELDPEQLTNVRPALAKSWDISPDGKTLTFHLRDDVKFHSGNPLTAADVVWSMR 119

Query: 119 RW--------AARDSLGRAMTAVGAEWKATDARTLTLTL---NEPFGMVLDALAKPSGFP 167
           R         +   S G +   +  +  A D+ T+ + L   N+P  +V+ +LA      
Sbjct: 120 RILHLNLAQASVWKSYGFSKKNIDGQVSAPDSFTVQIVLPKDNDP-QLVIYSLAALGNLG 178

Query: 168 PVILPERLAKMPASAP-------LPEVLGSGPFIFKRDEWVPGNKTVFVRNPNYVPRSEP 220
             +L  +  +                  GSGPF    + W   +     RNP+Y  R E 
Sbjct: 179 --VLDSKTVQSHQQDNDWGNRWLTTHEAGSGPFTL--ETWQAKDVLRMKRNPDYW-RGE- 232

Query: 221 SNGLAGSKKSNFERVEWLYLPDANSAVSALKRGEVDFIEQLPPDYIAPLRTDSNVKIGS- 279
                    +   RV   +  ++ +    +++G++D    +    I  LR D  + + + 
Sbjct: 233 ---------AKMSRVVLRHFQESQTLRLMIEKGDLDIANNMAVSDINALRGDPQLTVDAV 283

Query: 280 --GGAYQAFLVMNQLHPPFDNPKVRQALLQAVNQE----RFMAGMGFPLDMRMAYCATYF 333
             G  Y   + M + H  F NPKVR+A+   ++ +      M G G  L  R        
Sbjct: 284 QRGTMYYVAMSMKEAH--FANPKVREAVRYLIDYQGINKALMPGYGV-LHQRPIKA---- 336

Query: 334 ICGSPNDTSAGAEPYRKADVAKAKKMLADAGY-KGEKVVLMVPSDVPYLNAEALMAAQTM 392
             G P   S   +P  + DVA+AKK+LA+AGY  G    L V +D P+LN  A+    T+
Sbjct: 337 --GMP---STLPDPGYRLDVARAKKLLAEAGYPNGFNTTLRVLADQPFLNI-AIAVQSTL 390

Query: 393 KSIGLNVDAQTMDWASI-GARRAKR 416
              G+N    T     I GA R ++
Sbjct: 391 MQAGINAKIITGTGNQIYGAMRERK 415