Pairwise Alignments

Query, 311 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 328 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  219 bits (558), Expect = 7e-62
 Identities = 125/317 (39%), Positives = 191/317 (60%), Gaps = 17/317 (5%)

Query: 6   RRFLSTLPVMAVVAVVVFLLIHLSPGDPAALIAGDL--ATTEDIEKLRATLGLNLPLWQQ 63
           R  L  +P +  + ++ F L+ L+PGD A ++AG+   AT E +  LRA  GL+ P+ +Q
Sbjct: 13  RTLLQAVPTILGIVILNFFLLQLAPGDAADVLAGEAGSATEESVAALRARFGLDSPVLEQ 72

Query: 64  FTLWLGKLFTGDLGTSIFTQVPVAQLLGQRLEPTVSIAALTMLITLVVSVPLGTLAAYRA 123
              +LG L    LG S    +PVA L+ QRL  T+++ A+ + I +++ V LG+L A  A
Sbjct: 73  LATYLGNLAQFSLGFSPRYGMPVADLIAQRLPGTLTLMAVALFIAILLGVVLGSLMASFA 132

Query: 124 GSWIDRLVMLFAVLAFSVPVFLVGYLLVYSFAIQLPWFP----------VQGYVRLADGA 173
           G   DRL+ +F++L +S+P F +G +L+  F+++L W P          ++G+  L D A
Sbjct: 133 GRIPDRLLSIFSLLFYSIPSFWIGLMLIVLFSVKLGWLPSGGAATIGSQLKGFPALLDKA 192

Query: 174 GEWLRSLVLPCVNLALVYIALVTRMTRATVLEVLHEDYIRTARAKGLGVLPVLG-HALRN 232
               R +VLP  +LAL Y+A+  R+TRA +LEV + D++RTA AKGL    V   H LRN
Sbjct: 193 ----RYMVLPATSLALFYVAIYARLTRAAMLEVKNHDFVRTAYAKGLTPFGVTARHILRN 248

Query: 233 AAIPIATTIGAGIALLIGGVVVTETVFAIPGVGRLVIDSVQRHDYPVIQSVLLLSAGVYV 292
           A IPI T  G  I  ++GG VV ETV++ PG+GRL  ++V   D+ V+  +LLLS+ + +
Sbjct: 249 ALIPITTMAGMHIGGMLGGAVVVETVYSWPGLGRLAFEAVMGRDFTVLLGILLLSSLLVI 308

Query: 293 LINLLIDLSYRLFDPRI 309
           + N  +DL +   DPRI
Sbjct: 309 IANAAVDLVHAWLDPRI 325