Pairwise Alignments

Query, 300 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 315 a.a., peptide ABC transporter permease from Klebsiella michiganensis M5al

 Score =  183 bits (465), Expect = 4e-51
 Identities = 111/304 (36%), Positives = 171/304 (56%), Gaps = 11/304 (3%)

Query: 7   LNTAQAPAAPADDEAPFVPPRFRWVRKHPTLIIGALLLIAIAALSIAAPWIATHDPQDID 66
           L  A+ PA      +P+    +R +R++   ++  LLL  +A   +  P  +       D
Sbjct: 12  LRKAEIPALAQVTPSPW-RQAWRALRRNRLAMLCLLLLTVMALWCVLGPLWSPWQDDATD 70

Query: 67  PLARMQPPSAEHWFGTDALGRDVFSRAVWGGQVSMIVGATVAVLATFFGIALGLVAGFVR 126
            L   +PP A HW GTD LGRD+++R +  G++S+I+G    +L+   G  LG ++G+  
Sbjct: 71  ALMNNKPPGAAHWLGTDFLGRDIYTRLLLAGRISLIIGLLTMLLSVALGYLLGALSGYAG 130

Query: 127 W-ADGPVMRVMDGLMAIPGILLAIALMAVTR-------ASLTTVIIAITVPEIPRVVRLV 178
              D  +MR  D +M IPG+ L I   A+         + +  V+I +++ E P++ RLV
Sbjct: 131 GLTDKLIMRFADLVMTIPGLPLLIVAGAMLSELDFSPDSRIYMVVIMLSLLEWPKLARLV 190

Query: 179 RSLALTLREQLFVEAAHAVGTRLPTILVRHVLPNIVAPLVVQATFVAAAAVLTEAALSFL 238
           R   L+LRE+ F+ A   +G      L  H+LPN V  LVV AT   A A+L+E+ALS+L
Sbjct: 191 RGQCLSLRERDFMLATQILGLSARRRLFGHLLPNTVPILVVMATMAVANAILSESALSYL 250

Query: 239 GVGVPSQTPSWGNMMAEGRNFVTVAFHIILY--PGLLLAATVLAINLLGDGLRDALDPRL 296
           G+GV   TPSWGNMM    + +       L+  PG+ +  TV+AIN+LGDGLRDA+DP++
Sbjct: 251 GLGVVPPTPSWGNMMDAANSLIDFQRRPWLWMPPGIAIFITVIAINVLGDGLRDAMDPKM 310

Query: 297 ARQL 300
            ++L
Sbjct: 311 KQRL 314