Pairwise Alignments

Query, 343 a.a., Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1) from Variovorax sp. SCN45

Subject, 331 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  278 bits (712), Expect = 1e-79
 Identities = 152/323 (47%), Positives = 207/323 (64%), Gaps = 3/323 (0%)

Query: 14  EPLLEVDNLRTHFHTLAGVVRSVDGVSYTVRAGRTLGVVGESGCGKSVTALSILRLVPTP 73
           EPLL V NL     T    VR VD VSY+VR G  L +VGESG GK+V   + L L+P+ 
Sbjct: 4   EPLLSVSNLTVDLLTAKSAVRPVDEVSYSVRQGECLAIVGESGSGKTVMNFAPLGLMPSG 63

Query: 74  PGRHM-GAVRLRGTDLMQLSEREMRQIRGNRISMIFQEPMTSLNPVLTVGRQIAETVQLH 132
               + G+VR +G +L+ L ERE+R+ RG  I  IFQ+PM++LNPV  +GRQIAE  +LH
Sbjct: 64  VATQLSGSVRFQGQELIGLPEREIRKYRGKSIGFIFQDPMSALNPVRRIGRQIAEMAELH 123

Query: 133 QKASRADALKRAVEMLRVVQIPEPERRVNEYPHQLSGGMRQRVMIALALACNPEVLIADE 192
              S   A +RA++++++V I +P  R++++PH+LSGG+RQR++IA+ALA  P++LIADE
Sbjct: 124 LNMSPRAAEERALDLVKLVGISDPAARLSQFPHELSGGLRQRIVIAIALAGEPKLLIADE 183

Query: 193 PTTALDVTIQAQILDLIKRLQKELGMGVVMITHDLGVVAESCDRVVVMYAGRKVEEADVI 252
           PTTALDVT+QAQIL L+K LQ  L M +V+ITHD+GVVA + D V+VMYA R  E   V 
Sbjct: 184 PTTALDVTVQAQILRLLKDLQHRLNMAMVLITHDMGVVAGAADNVLVMYAARGAERGPVD 243

Query: 253 DLFDRPLHPYTRALMASMPAM-NTASTRLTEIPGLVPAAHELGRGCAFAARCSHARARCR 311
            +   P HPYT+ L+ ++P   +   +    +PG+ P       GCAFA RC  A A C 
Sbjct: 244 KVLVNPRHPYTKGLINAIPRREDPVGSEFRGLPGVPPTLGAPINGCAFAPRCEFAVAECA 303

Query: 312 AEAPQLTRQGGDHV-VACFAVEE 333
              P +T      V VAC  V +
Sbjct: 304 RSRPPMTATADSSVFVACPIVNQ 326