Pairwise Alignments

Query, 343 a.a., Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1) from Variovorax sp. SCN45

Subject, 326 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  305 bits (780), Expect = 1e-87
 Identities = 163/321 (50%), Positives = 210/321 (65%), Gaps = 3/321 (0%)

Query: 15  PLLEVDNLRTHFHTLAGVVRSVDGVSYTVRAGRTLGVVGESGCGKSVTALSILRLVPTPP 74
           PLLE+DNL   F T AG V+++ GVS TV  G TLG+VGESG GKSVTA +++ L+  P 
Sbjct: 2   PLLEIDNLHVCFDTRAGTVQALRGVSLTVAPGETLGIVGESGSGKSVTAQAVMGLIDVPG 61

Query: 75  GRHMGAVRLRGTDLMQLS-EREMRQIRGNRISMIFQEPMTSLNPVLTVGRQIAETVQLHQ 133
               G +   G  L   +     R I G  I+MIFQ PMTSLNP++TVG QIAE +++H 
Sbjct: 62  RISDGEILWEGKPLAGFAVANAARDIWGREITMIFQNPMTSLNPLMTVGAQIAEVIEVHM 121

Query: 134 KASRADALKRAVEMLRVVQIPEPERRVNEYPHQLSGGMRQRVMIALALACNPEVLIADEP 193
            +SR  A +RA E+L  V I   ERR+++YPH+ SGGMRQRVMIA+ +AC P++LIADEP
Sbjct: 122 GSSRRAARRRAAELLSAVGISGAERRLDQYPHEFSGGMRQRVMIAMGIACEPKLLIADEP 181

Query: 194 TTALDVTIQAQILDLIKRLQKELGMGVVMITHDLGVVAESCDRVVVMYAGRKVEEADVID 253
           TTALDVTIQAQIL+L+  LQ+++G+ +V+ITHDLG+VA  C RV VMYAG+ VE   V  
Sbjct: 182 TTALDVTIQAQILELLAELQEKMGLAIVLITHDLGIVAGLCHRVAVMYAGQIVETGPVDA 241

Query: 254 LFDRPLHPYTRALMASMPAMNTASTRLTEIPGLVPAAHELGRGCAFAARCSHARARCRAE 313
           +F+ P HPYT+ L+ S P ++    RLT I G  P   +   GCAF  RC      C  +
Sbjct: 242 IFENPSHPYTQGLIRSTPGLDADEERLTAIDGAPPGLLQPPSGCAFLPRCPIGDEGC--Q 299

Query: 314 APQLTRQGGDHVVACFAVEEQ 334
            PQ+ R  G   VAC    EQ
Sbjct: 300 GPQVLRAVGAGTVACRKAGEQ 320