Pairwise Alignments

Query, 343 a.a., Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1) from Variovorax sp. SCN45

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  276 bits (707), Expect = 7e-79
 Identities = 141/260 (54%), Positives = 188/260 (72%), Gaps = 1/260 (0%)

Query: 13  GEPLLEVDNLRTHFHTLAGVVRSVDGVSYTVRAGRTLGVVGESGCGKSVTALSILRLVPT 72
           G  LLEV +L   F +L G  R+  GVS+ V AG TL ++GESG GKSV+A +I+ L+ T
Sbjct: 3   GPHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDT 62

Query: 73  PPGRHM-GAVRLRGTDLMQLSEREMRQIRGNRISMIFQEPMTSLNPVLTVGRQIAETVQL 131
           PPG    G+V  RG DL  LSE E R + G RI+MIFQ+P++ LNPV T+G Q+ E   +
Sbjct: 63  PPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTV 122

Query: 132 HQKASRADALKRAVEMLRVVQIPEPERRVNEYPHQLSGGMRQRVMIALALACNPEVLIAD 191
           H  AS A+A +RA+E+L  V IPEPE+R+++YPHQ SGG RQR+MI +A+A  PE+LIAD
Sbjct: 123 HGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIAD 182

Query: 192 EPTTALDVTIQAQILDLIKRLQKELGMGVVMITHDLGVVAESCDRVVVMYAGRKVEEADV 251
           EPTTALDV++QAQIL+L+K+LQ E G+ ++MITHDL V A   DRV+VM +GR VEE + 
Sbjct: 183 EPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEA 242

Query: 252 IDLFDRPLHPYTRALMASMP 271
             +F+ P H YTR L+ ++P
Sbjct: 243 RAVFENPAHSYTRTLINALP 262



 Score =  180 bits (457), Expect = 7e-50
 Identities = 100/267 (37%), Positives = 159/267 (59%), Gaps = 16/267 (5%)

Query: 13  GEPLLEVDNLRTHFHTLAGV------VRSVDGVSYTVRAGRTLGVVGESGCGKSVTALSI 66
           G+P+LEV N+   +   +G       + +V  +S+ V AG T+G+VGESG GKS  A  +
Sbjct: 277 GKPILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVL 336

Query: 67  LRLVPTPPGRHMGAVRLRGTDLMQLSEREMRQIRGNRISMIFQEPMTSLNPVLTVGRQIA 126
           L L     G  +      G D++++  +++   R  ++ M+FQ+P +S+NP +TV   ++
Sbjct: 337 LGLNEASGGEAL----FHGRDVLKMDRKQLLAFR-RKVQMVFQDPYSSMNPRMTVFDIVS 391

Query: 127 ETVQLHQKASRADALK-RAVEMLRVVQI-PEPERRVNEYPHQLSGGMRQRVMIALALACN 184
           E  ++H+        + R  E+L +V + PE  +R   YPHQ SGG RQR+ IA ALAC+
Sbjct: 392 EPWRIHKDILEKTRWRDRVTELLGLVGLNPEHAKR---YPHQFSGGQRQRIAIARALACD 448

Query: 185 PEVLIADEPTTALDVTIQAQILDLIKRLQKELGMGVVMITHDLGVVAESCDRVVVMYAGR 244
           PE+++ DE  +ALDV++Q Q++DL+  L+  LG+  + ITHDL +V    DR++VM +G 
Sbjct: 449 PELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGE 508

Query: 245 KVEEADVIDLFDRPLHPYTRALMASMP 271
            VE A   ++F  P H YTR L+ + P
Sbjct: 509 IVEHATTEEIFRNPQHAYTRQLINATP 535