Pairwise Alignments

Query, 332 a.a., Oligopeptide ABC transporter, ATP-binding protein OppF (TC 3.A.1.5.1) from Variovorax sp. SCN45

Subject, 337 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  284 bits (727), Expect = 2e-81
 Identities = 153/315 (48%), Positives = 202/315 (64%), Gaps = 15/315 (4%)

Query: 16  RKHYTAPKRWLSPRKPPIQAVDGVSFSVARGETLSLVGESGCGKTTTAKSVLRLVEPSAG 75
           R H T PK       P   AVD V   +ARGE + LVGESGCGK+T  + V  L+  S+G
Sbjct: 33  RLHLTRPK-------PLTHAVDRVDLRIARGEVVGLVGESGCGKSTLGRMVAGLLPVSSG 85

Query: 76  SVQLEGEELLTLSPEEMRMRRRDLQIIFQDPYASLNPRLTAGDIVAEPMRNFSSLGTGGA 135
           +  ++G+ L +L+P+E +  R  +Q+IFQDP +SLNPRL    IV E           GA
Sbjct: 86  TTSVDGKPLESLTPQERKALRLKVQMIFQDPSSSLNPRLRVDRIVGEGALLHGLTDRKGA 145

Query: 136 AERRERVQWLFSRVGLRPEAAKKYPHEFSGGQRQRLGIARALALNPKLIVCDEPVSALDV 195
            +    V     R GL P+  ++YPH+FSGGQRQR+GIARALA+ P+L+VCDE V+ALDV
Sbjct: 146 DDY---VSAQLQRAGLSPQLRQRYPHQFSGGQRQRIGIARALAVQPELLVCDESVAALDV 202

Query: 196 SVQAQVVNLLMDLQAEFGIAYLFVAHDLAVVRHISHRVAVMYLGHIVEIADRDTLFSAPL 255
           S+QAQ++NL MDL+ E G+ YLF++HDL VV H+  RV VMYLG +VE A  D LF+   
Sbjct: 203 SIQAQILNLFMDLRDELGLTYLFISHDLGVVEHLCDRVIVMYLGRVVETASVDDLFARAN 262

Query: 256 HPYTEILLSAVPVPNPRTPARRMLLQGDPPSPANPPSGCRFHTRCPMAQAVCKEKVPELS 315
           HPYT+ LL+ +P  + R+  R   +QG+ PSP +PP+GC FH RCP A A C+E+VP L 
Sbjct: 263 HPYTQALLAQIPRFDIRS-TRYDAIQGEIPSPLDPPAGCHFHPRCPHAMARCREEVPALR 321

Query: 316 ERPSSSNGGHWVACH 330
           E     +  H  ACH
Sbjct: 322 E----VSPNHQSACH 332