Pairwise Alignments

Query, 436 a.a., Phenylacetate-coenzyme A ligase (EC 6.2.1.30) from Variovorax sp. SCN45

Subject, 446 a.a., capsule biosynthesis protein CapK from Vibrio cholerae E7946 ATCC 55056

 Score = 68.6 bits (166), Expect = 4e-16
 Identities = 102/436 (23%), Positives = 169/436 (38%), Gaps = 62/436 (14%)

Query: 18  SRDEIAALQLSRLRATLQRAYDNVPHYRKAFDAKGVHPDDLKSLADLSKFPFTVKSDLRD 77
           SR  +A  Q  +L+ TL+ A ++VP Y+           ++ +L +L  FP+  KS LR 
Sbjct: 48  SRTHLADYQHKQLKKTLENARNHVPFYQDL---------EVPNL-ELEAFPYLDKSVLRR 97

Query: 78  NYPFGMFAVPRTQVARIHASSGTTGKPTVVGYTKNDIDTWADLVARSIRAAGGRPGD--- 134
           ++     +  +  V    A+SGTTG P  +   ++ +      VAR +  AG R GD   
Sbjct: 98  DHK-QFISQNKPSVVVKGATSGTTGTPLTILQDRHSVIREQAFVARQLAWAGYRKGDKRA 156

Query: 135 ------MVHVSYGYGLFTGGLGAHYGAERAGCTVIPMSGGQTEKQVQLIQDFKPNIIMVT 188
                 +V +S   G F            +   + P +       +Q + DF   +I   
Sbjct: 157 WIRGDMVVPLSQKQGPFWRYSWFEQMIVLSSFHLTPKT---MSSYLQAMVDFGVEVIQAY 213

Query: 189 PSYMQVIIEQFERQGLDAKDSSLKIGIFGAEPWTEAMRRDIEARAGIDAVDIYGLSEVMG 248
           PS +  +    E        + LK  +  +E  +   R+ IE R G    D YGL E + 
Sbjct: 214 PSSIATLARYLEANQ-SYYPAKLKSIMTSSESLSAEDRQVIETRFGCKVFDWYGLFERVA 272

Query: 249 PGVASECVESKDGPVIWEDHFYPEIIDPETGELKADGE-EGELVFTSLSKEAMPIIRYRT 307
                +C   +          Y  + D    EL A G+   ELV T+ + +  P+IRY+T
Sbjct: 273 --AIGQCEHGR----------YHLLSDYSHVELLAAGDGRYELVGTNFNNQYFPLIRYKT 320

Query: 308 RDLTRLLP----PTSRAFRRMGKIVGRSDDMMI------IRGVNVFPTQVEEIVLAHQAL 357
            D   L      P  R F  + +I GR  D ++      +  +N  P  +  I+      
Sbjct: 321 GDHVHLSENEACPCGRVFPVIERIEGRIGDYLVGEDGQKVHILNHIPKGIAGIMACQFVQ 380

Query: 358 SGLYQVHVSRADKLDQVEIHCELKPSDAAAADRAAIGDWVQHRVKTLIGISTSVVVHAPD 417
           S   Q+ V      +Q     + +               +    +  +G S +V +    
Sbjct: 381 SERGQIVVKVVADAEQFNQEQQKQ---------------LISNTQARLGSSLNVTIDIVS 425

Query: 418 EMERTQTGKARRVVDT 433
            +ERT  GK R+ + T
Sbjct: 426 ALERTANGKIRQAICT 441