Pairwise Alignments

Query, 286 a.a., Putative deoxyribonuclease YjjV from Variovorax sp. SCN45

Subject, 255 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

 Score =  104 bits (260), Expect = 2e-27
 Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 19/263 (7%)

Query: 5   IDTHCHLDAHEFGAEMPAIRARAAGLGVAMCVIPAVGAFNFQTV--RELAHRQGDAYALG 62
           IDTH H+ A EF  +   + ARA  +G+   ++P +   +   +   E A+       +G
Sbjct: 2   IDTHAHVYASEFDHDRDEVIARARQVGIEKILMPNIDLNSIAPMLATEKAYPDLCHSMMG 61

Query: 63  IHPLCTGAAADADLEALDAELSARRDDPRLVAVGEIGLDYFVEGLDADRQERFFHTQLQL 122
           +HP       DA+++   A +         +AVGEIG+D + +      QE  F TQL  
Sbjct: 62  LHP----CYVDANVKQTLATIYEWFSRHTFIAVGEIGIDLYWDKTFKAEQEMAFLTQLNW 117

Query: 123 ARKHGLPILIHVRRSVDKVLKHLRQTAGGKPWLGIAHAFNGSEQQAGACIALGLKLGFGG 182
           A++  LP++IH R S+++ L  L+Q   G+   G+ H F GS  +A A   LG  LG GG
Sbjct: 118 AKELDLPVVIHTRDSLNETLALLKQAQDGR-LRGVFHCFGGSVDEAKAINDLGFHLGIGG 176

Query: 183 AVTFERALQLRRLAASLPIESIVMETDAPDIQPHWLYRTQAQRDAGQPQGRNEPGELPRI 242
             TF+ +  + ++   L +  +++ETD P + P                 RNEP     I
Sbjct: 177 VSTFKNS-GMDQVIPQLDLNYVILETDCPYLAP-----------VPHRGKRNEPMLTHLI 224

Query: 243 AEVVAGLRGIGIEELALATTRNA 265
           +E VA LR + + E+   T  N+
Sbjct: 225 SEKVAQLRSLPLGEVIKITNNNS 247