Pairwise Alignments

Query, 302 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 91.3 bits (225), Expect = 2e-23
 Identities = 66/296 (22%), Positives = 142/296 (47%), Gaps = 22/296 (7%)

Query: 11  LTVFLLVVPPLLWAGNAVVGRLVRELVSPLTLNFVRWVIAFLIVLPLAAPVLRRGSPLWP 70
           L + L+ +  + W  + V  +++ E + P+T+ F+R VIA +I++       +     + 
Sbjct: 6   LGILLMFLTVIFWGISFVSTKIILEFIPPITIGFIRVVIAAVILIFFIRNFTKYSKEDFV 65

Query: 71  HWRRYALLGLLGIGLYNAFQYLALQTSTPINVTLVGSSVPLWMLATGALFFGARISAREV 130
           +     L G LGI  Y  F+ +AL+ +T  N +L+ ++VP++ L    +      S  + 
Sbjct: 66  Y---IVLAGFLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIVEKKIPSKIKY 122

Query: 131 GGALLSMAGVLLVLSRGEWRQLMALRLVP-GDLYMILGSIAWAFYSWMLARTHE------ 183
            G+L+ + GV +++  G++     L L P GD+ M      W  Y++++ +  +      
Sbjct: 123 FGSLIGLFGVFILILNGKF----VLELNPLGDILMFGAVCTWVLYTFVIQKLQKHDDLKV 178

Query: 184 PKDVRQDWSAFLMAQLVFGIGWSGALAAGEWTLTDAHIDLGWPLLAAMLFIGIGPAVLAY 243
            +D+    + F +   +  +G++G     E+T+      L   +  ++L++ I  + +AY
Sbjct: 179 TRDITLIGAVFFIPFTIMELGYNGMF---EFTIL-----LNPYIAFSLLYLAIFCSAIAY 230

Query: 244 RCWGTGVQRAGPQAASIFMNLTPLFAAVLSAAFLRELPHWYHGAAFVLIVGGIVVS 299
             W   ++ AG    +  + + P+ A +  A  L+ +P+ Y     VL++ G+ +S
Sbjct: 231 LFWNMAIRLAGASTTTNGVYIIPIVAMITDAIILKNIPNIYAIIGAVLVLFGVYIS 286