Pairwise Alignments

Query, 354 a.a., ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  231 bits (588), Expect = 3e-65
 Identities = 135/308 (43%), Positives = 195/308 (63%), Gaps = 12/308 (3%)

Query: 8   IDIANCAKTYADGTRGLQPTDLRVEAGEVLALLGPSGCGKTTLLRLIAGLESPDAGSRIV 67
           I ++  +K++ DG   +   +L V  GE L +LGPSGCGKTT+LR+IAG E+ D G +I+
Sbjct: 18  IRLSGISKSF-DGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQG-QIL 75

Query: 68  FGDQDVTQRPVEHRGVGMVFQSYALFPQMTVAANIGYGLRIRGVSPEEEKRSVGELVDLV 127
             DQDVTQ P E R V  VFQSYALFP MTV  N+ +GLR++ V   E +  V E + +V
Sbjct: 76  LDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMV 135

Query: 128 RLGGLENKRPAELSGGQRQRVALARAVAVRPRVLLLDEPLAALDAKLKESLRDELAELLR 187
           RL  +  ++P +LSGGQ+QR+A+ARAV  +P+VLLLDE L+ALD KL++ ++ EL +L R
Sbjct: 136 RLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQR 195

Query: 188 RLHITAIHVTHDQQEALAIADRLAVMRAGRIVQVGRGEDLYRAPSHPFVAEFLGRVNRLE 247
           +L IT I VTHDQ+EAL+++DR+ VMR+G+I Q G   ++Y  P + FVA F+G +N  +
Sbjct: 196 QLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQ 255

Query: 248 RKA-DAIAQGVVRLGGTTLPCPPAWRDHA------TLLVRPEDI---EVGTPQLDWAAGI 297
               D I +  +R+    +     + D         +L+RPED+   E+   +     G 
Sbjct: 256 ATTIDRIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPEDLRIEEIKESEEKGIVGH 315

Query: 298 VERRTFLG 305
           V  RT+ G
Sbjct: 316 VTDRTYKG 323