Pairwise Alignments

Query, 267 a.a., ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

Subject, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

 Score = 83.6 bits (205), Expect = 4e-21
 Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 12/246 (4%)

Query: 19  IVSLFMIAPMLLSVMAGLVNNYSVGLK-SGFTLRWLGEVWENYG-GTVGW-SLALAVACV 75
           +V LF+  P+++ ++A   N    G+K  GFT +W   +  N       W S+ +AV   
Sbjct: 12  LVYLFLYLPIIV-LIANSFNENKFGIKWGGFTTKWYHALMNNDSLMQAAWHSINVAVFSA 70

Query: 76  IGTVLIGVPCAYALARSRSRAARIFEELLTLPVAVPGLATALALILAYGQLTAFRQSFAF 135
               LIG   A AL R + +  ++   +L + +  P +  A++L+  +  + A +  F  
Sbjct: 71  TAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGA-KLGFFT 129

Query: 136 ILVGHIVFTLPFMVRTVSSAFERDDLLALEEAARSLGANFRQRFMGILVPAVFPAIVAGS 195
           +L+ HI F LPF+V TV +     D+  LE AA+ LGA        I++P   PA+ AG 
Sbjct: 130 LLIAHITFCLPFVVVTVYTRLNGFDVKMLE-AAKDLGAGEWVILKKIILPLAKPAVAAGW 188

Query: 196 LMVFTLSVGEFNLTWMLHTPLTRTLPVGLADSYASMRIEIG---SAYTLVFFAVILPVLW 252
           L+ FTLS+ +  ++  +  P    LP+ +   Y+ +++ I    +A   V   V L ++ 
Sbjct: 189 LLSFTLSLDDVIISSFVTGPTYEILPLKI---YSMVKVGISPEVNALATVMLVVSLVLVV 245

Query: 253 ALQYLA 258
           A Q LA
Sbjct: 246 ASQLLA 251