Pairwise Alignments

Query, 336 a.a., ABC-type Fe3+ transport system, periplasmic component from Variovorax sp. SCN45

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 77/317 (24%), Positives = 130/317 (41%), Gaps = 31/317 (9%)

Query: 16  ATLAAGSAMAQTAICYNCPTE-----WADWGTQ-----LKAIKAKTGVTVPPDNKNSGQS 65
           ATL AGSA A + +      E     + +WG       L+    +TG+ V      S ++
Sbjct: 5   ATLLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNET 64

Query: 66  L-AQMAAEKASPVADVTYLGVTFAVQAAKDGL---VEPYKPAAWKDIP----DGLKDPAG 117
           L A++         D+      F  +   +G+   ++  K + +K++     D   DP  
Sbjct: 65  LYAKLKTHNQG--YDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPNN 122

Query: 118 NWFTIHSGTL-GFMVNVDALKGKPVPKSWADLLKPEYKGLIGYLDPASAFVGYVGAVAVN 176
           ++   H   + G  VN D        +SW DL KPE KG +  +D     V ++    + 
Sbjct: 123 DYSIPHVVAITGLAVNTDMYDPNDF-QSWGDLWKPELKGQLMLMDDTRE-VFHIALRKLG 180

Query: 177 EARGGTLDNFKPAIDYFKALQKNEP---IVPKQTSYARVLSGEIAILLDYDFNAYRAKYK 233
            +   T D  K   + +  LQK  P   +       A  LSGE+ + + ++ +A  A+ K
Sbjct: 181 YSGNSTDD--KQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQ-K 237

Query: 234 DKANVAFVIPSEGTLAVPYVMSLVAKAPHAADAKKVLDFTLSDE--GQAIWAKAYLRPVR 291
           +   +  V P EG +      ++ + A +   A K++DF L  E   Q      YL  V+
Sbjct: 238 EGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLTGVK 297

Query: 292 ASAMPKEIEAQFLPASE 308
           AS    +  A   P+ E
Sbjct: 298 ASNDKFQDVAPLFPSQE 314