Pairwise Alignments

Query, 336 a.a., ABC-type Fe3+ transport system, periplasmic component from Variovorax sp. SCN45

Subject, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 86/351 (24%), Positives = 148/351 (42%), Gaps = 31/351 (8%)

Query: 6   HRLARLGLLAATLAAGSAMA--QTAICYNCPTEWADW--GTQLKAIKAKTGVTVPPDNKN 61
           ++L    L AA L   +AMA  Q    YN    W+++     L+    +TG+ V      
Sbjct: 3   NKLFASALCAAALFTTNAMAKDQELYFYN----WSEYIPSEVLEDFTKETGIKVIYSTYE 58

Query: 62  SGQSL-AQMAAEKASPVADVTYLGVTFAVQAAKDGLVEPY---KPAAWKDI-PDGLKDP- 115
           S +S+ A++  + A    D+      F  +  K+G+++     K + +KD+ P+ L  P 
Sbjct: 59  SNESMYAKLKTQGAG--YDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPF 116

Query: 116 -AGNWFTIHS--GTLGFMVNVDALKGKPVPKSWADLLKPEYKGLIGYLDPASAFVGYVGA 172
             GN F+I    G  G  +N D L  K + K+W DL   ++ G +  +D A        +
Sbjct: 117 DPGNKFSIPYIWGATGIGINTDMLDKKSL-KNWGDLWDAKWAGQLMLMDDAREVFHIALS 175

Query: 173 VAVNEARGGTLDNFKPAIDYFKALQKNEPIVPKQTSYARVLSGEIAILLDYDFNAYRAKY 232
                         K A    K L  N  +          L+GE+++ + ++ +AY A+ 
Sbjct: 176 KLGYSPNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMAR- 234

Query: 233 KDKANVAFVIPSEGTLAVPYVMSLVAKAPHAADAKKVLDFTLSDEGQAIWAK--AYLRPV 290
           ++ A +  + P +GT+     +S+ A A +   A K++DF L  E  A  A    Y  PV
Sbjct: 235 QEGAPIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPV 294

Query: 291 RAS--AMPKEIEAQFLPASEYARAKSVDYGRM---AAAQKAFSDEYLKEVR 336
           + +   +PKE        S Y     +D G             DEY ++++
Sbjct: 295 KTAHDLLPKEFAND---PSIYPPQSVIDNGEWQDEVGEASVLYDEYFQKLK 342