Pairwise Alignments

Query, 339 a.a., Transcriptional regulator, LacI family from Variovorax sp. SCN45

Subject, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

 Score =  152 bits (385), Expect = 9e-42
 Identities = 105/342 (30%), Positives = 179/342 (52%), Gaps = 34/342 (9%)

Query: 2   SIQAVAAKAGVSVATVSRAFNFPDKVTPATRELVERVARELNYLPNASARTLRTQRSRVL 61
           +++ +A  AGVS +TVS   N    V+    E V   A++LNY P+A AR+L+  R++ +
Sbjct: 3   TMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTKTI 62

Query: 62  GIVLPTLLNPTFAECLQGIARAAVAGGYAIIPVTTGYRLDEEERAVHLLLAGNVDGLILV 121
           G+++ T  NP F E ++G+ R+    GY +I   T       + +++ LL   VDGL+L+
Sbjct: 63  GMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLLLM 122

Query: 122 VSNPSTSATLPRLQAAGVPYVLAYNRHAEHPCVSVD------SEGAVAD--------AVT 167
            S         RL          ++R+ + P V +D      +   + D        A  
Sbjct: 123 CSTLEGE----RLD--------VFDRYPDIPIVVMDWGPILFASDKIQDNSLQGGYMAAK 170

Query: 168 RLVLLGHRRIAMVSGTLAASDRAQQRYRGYLKGMADTGLDVLP--LIEVPF-VETAIDAL 224
            L+  GH+ I  ++G L    +AQ RY GY + +A+ G+ + P  ++E  F  E    A 
Sbjct: 171 HLIECGHKEIGCITGPL-IRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAF 229

Query: 225 SAQLRVRQRPTALICSNDLLAIRSIRAAHLSGLSVPDDLSVVGFDGIALGEDLTPALTTI 284
               +  + P+AL  SND++A+  I+AA   GL VPDDLS++G+D + + + +TPALTTI
Sbjct: 230 EKLYQRGKLPSALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTI 289

Query: 285 AQPNSDIGRQSVELLIQAIAGGTT----LQADSSLLLPHAFR 322
            QP   +G+ +V+ L+  +    T    +Q + +L++ ++ R
Sbjct: 290 HQPKYRLGKAAVDTLLYRLENPDTTAQVVQLEPTLVVRNSVR 331