Pairwise Alignments

Query, 339 a.a., Transcriptional regulator, LacI family from Variovorax sp. SCN45

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (449), Expect = 3e-49
 Identities = 115/321 (35%), Positives = 181/321 (56%), Gaps = 10/321 (3%)

Query: 2   SIQAVAAKAGVSVATVSRAFNFPDKVTPATRELVERVARELNYLPNASARTLRTQRSRVL 61
           +++ VA  AGVS ATVSRA   P+KV+ +TR+ VE    E  Y PN+ AR LR   S+ +
Sbjct: 3   TMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTI 62

Query: 62  GIVLPTLLNPTFAECLQGIARAAVAGGYAIIPVTTGYRLDEEERAVHLLLAGNVDGLILV 121
             ++P + +P F+E ++GI  AA+  GY ++   +G +   E   V+L+     DG++L+
Sbjct: 63  VAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLL 122

Query: 122 VSNPSTSATLPRLQAAGVPYVLA--YNRHAEHPCVSVDSEGAVADAVTRLVLLGHRRIAM 179
            ++     + P  Q    P V+A  +    E P V +D+  +  +AV  L  LGH+RIA 
Sbjct: 123 GTDLPFDVSKPE-QKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQ 181

Query: 180 VSGTLAASDRAQQRYRGYLKGMADTGLDVLPLI----EVPFVETAIDALSAQLRVRQRPT 235
           +SG   A+   Q R++GY + +   G+ + P      +  F E    A+   L + ++PT
Sbjct: 182 ISGPQHAA-LCQFRHQGYQQALRRAGITMNPTYCTFGDFTF-EAGAKAVRQLLALPEQPT 239

Query: 236 ALICSNDLLAIRSIRAAHLSGLSVPDDLSVVGFDGIALGEDLTPALTTIAQPNSDIGRQS 295
           A+ C ND +AI +I+ A   GL VP DLSVVGFD I   +   P LTTI+QP  +IGRQ+
Sbjct: 240 AIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQA 299

Query: 296 VELLIQAIAGGTTLQADSSLL 316
           + ++++ +  G  ++A S LL
Sbjct: 300 MLMMLELLR-GHDVRAGSRLL 319