Pairwise Alignments

Query, 339 a.a., Transcriptional regulator, LacI family from Variovorax sp. SCN45

Subject, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  159 bits (403), Expect = 7e-44
 Identities = 106/308 (34%), Positives = 156/308 (50%), Gaps = 7/308 (2%)

Query: 2   SIQAVAAKAGVSVATVSRAFNFPDKVTPATRELVERVARELNYLPNASARTLRTQRSRVL 61
           ++Q VA + GV+  TVSR    PD V  ATRE +      L Y+ N +   L    S+ +
Sbjct: 8   TLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSKAI 67

Query: 62  GIVLPTLLNPTFAECLQGIARAAVAGGYAIIPVTTGYRLDEEERAVHLLLAGNVDGLILV 121
           GI+LP+L N  FA  +QGI     A GY  +    GY  +EEER +  LLA  VDGLIL 
Sbjct: 68  GILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLILT 127

Query: 122 VSNPSTSATLPRLQAAGVPYVLAYNRHAE--HPCVSVDSEGAVADAVTRLVLLGHRRIAM 179
            S+  T  TL  + ++GVP V      A      V +D   A   AV +++  G R IA 
Sbjct: 128 ESH-HTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIAY 186

Query: 180 VSGTLAASDRAQQRYRGYLKGMADTGLDVLPLIEVPFVETAIDALSAQLRVRQRP--TAL 237
               L    R + R +GY + M + GL +  ++       ++ A        + P    +
Sbjct: 187 FGARL--DTRTKLRMQGYDQAMQEAGLPIKHVLTGSHSSFSLAAQLLDEAFARYPDLDGV 244

Query: 238 ICSNDLLAIRSIRAAHLSGLSVPDDLSVVGFDGIALGEDLTPALTTIAQPNSDIGRQSVE 297
            C+ND +AI ++  A   G+ VP+ LSV+G++ + +G  +TP LT++  P   IG +S E
Sbjct: 245 FCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKSAE 304

Query: 298 LLIQAIAG 305
           LLI A+ G
Sbjct: 305 LLIAALKG 312