Pairwise Alignments

Query, 815 a.a., DNA translocase FtsK from Variovorax sp. SCN45

Subject, 960 a.a., DNA translocase FtsK from Vibrio cholerae E7946 ATCC 55056

 Score =  565 bits (1455), Expect = e-165
 Identities = 297/506 (58%), Positives = 378/506 (74%), Gaps = 11/506 (2%)

Query: 313 QKPLFKELPDSKLPQVDLLDAAQARQETVSSDTLEMTSRMIEKKLKDFGVEVRVVLASPG 372
           QK +    P   +P ++LL   + R+  +  + LE  +R++E KL D+ ++ +VV   PG
Sbjct: 455 QKAVNLPKPTEPMPTLELLYHPEKRENFIDREALEEIARLVESKLADYKIQAQVVDIFPG 514

Query: 373 PVITRYEIEPATGVKGSQIVNLAKDLARSLSLVSIRVVETIPGKNYMALELPNAKRQSIK 432
           PVITR+E++ A GVK S+I +L+ DLARSLS +++RVVE IPGK Y+ LELPN  RQ++ 
Sbjct: 515 PVITRFELDLAPGVKVSRISSLSMDLARSLSAMAVRVVEVIPGKPYVGLELPNMSRQTVY 574

Query: 433 LSEILGSQIYNEGKSMLTMGLGKDIIGNPVVADLAKMPHVLVAGTTGSGKSVGINAMILS 492
           LS+++ S  + E KS  T+ LG+DI G+ VVADL+KMPHVLVAGTTGSGKSVG+N MILS
Sbjct: 575 LSDVIASPQFKESKSPTTVVLGQDIAGDAVVADLSKMPHVLVAGTTGSGKSVGVNVMILS 634

Query: 493 LLYKAEARDVRLLMIDPKMLEMSVYEGIPHLLAPVVTDMRQAAHGLNWCVAEMERRYKLM 552
           +LYKA   DVR +MIDPKMLE+SVYEGIPHLLA VVTDM+ A++ L WCV EMERRYKLM
Sbjct: 635 MLYKASPEDVRFIMIDPKMLELSVYEGIPHLLAEVVTDMKDASNALRWCVGEMERRYKLM 694

Query: 553 SKLGVRNLAGYNTKIDEAKAREEFIYNPFSLTPD----DPEPLKREPHIVVVIDELADLM 608
           S LGVRN+ G+N K+  A      IY+P     D    +P  L++ P+IVVV+DE ADLM
Sbjct: 695 SVLGVRNIKGFNDKLRMAAEAGHPIYDPLWKDGDSMESEPPLLEKLPYIVVVVDEFADLM 754

Query: 609 MVVGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDSR 668
           MVVGKK+EELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTR+AF VS+K DSR
Sbjct: 755 MVVGKKVEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRVAFTVSTKTDSR 814

Query: 669 TILDQMGAEALLGMGDMLYMPSGTGLPVRVHGAFVSDEEVHRVVAYLKSQGEPDYIEGVL 728
           TILDQ GAE+LLGMGDMLY+P+G+   +RVHGAF SD++VH VV   K++G+P+YI  ++
Sbjct: 815 TILDQSGAESLLGMGDMLYLPAGSSHTIRVHGAFASDDDVHAVVNNWKARGKPNYISEII 874

Query: 729 EGGTVDGDGDGDMLGG---GGDAEKDPMYDQAVEVVLKNRKASISLVQRHLKIGYNRAAR 785
           +G      G   +L G     D E DP++DQ VE V++ R+ S+S VQR  KIGYNRAAR
Sbjct: 875 QG----DHGPEALLPGEQSESDEELDPLFDQVVEHVVETRRGSVSGVQRRFKIGYNRAAR 930

Query: 786 LVEDMEKAGLVSAMSGSGQREILVPA 811
           +VE +E  G+VSA   +G R++L PA
Sbjct: 931 IVEQLEAQGIVSAPGHNGNRDVLAPA 956



 Score = 77.4 bits (189), Expect = 4e-18
 Identities = 88/351 (25%), Positives = 146/351 (41%), Gaps = 61/351 (17%)

Query: 29  EITLIAGFAALLFWLLAMLSFTLSDAAWSTSGTGGEIKNWGGRVGAWLADGSYFVAGYSV 88
           E  LI  F   +F  +A+ SF  +D +WS +  G +I N GG VGAWLAD  +FV G   
Sbjct: 32  ESGLILAFLFSIFLAVALFSFNPADPSWSQTAWGTDIHNAGGLVGAWLADTLFFVFG--- 88

Query: 89  WWCLAAGLRAWLSSLASWLRGGEPASTAEQQPPRGRFNRSRLAFW----LGLVLLL---C 141
              LA  L  ++++ A+W+              R   +      W    LGL ++L   C
Sbjct: 89  --SLAYPL-PFITAFAAWV----------LLRKRDEGDEIDFTLWGTRLLGLTIVLLTSC 135

Query: 142 ASAMLEWSRLYRLEGHLPGGAGGGAIGALVGPSSVRWLGFTGSALVAIAGGVIGSALVFR 201
             A + +  ++         + GG IG ++   ++  L   G+ LV +     G  L+  
Sbjct: 136 GLADINFDDIWYF-------SSGGVIGDVLTSLALPTLNILGTTLVLLFLWGAGITLLTG 188

Query: 202 FSWSLIAERIGARAYSLFES--RREKREMAADIAMGKQAARERAEADEPAFTRGGEASGR 259
            SW  I E IG R+ + F     R + E A  +           E  EP F+   +    
Sbjct: 189 ISWLRIVEWIGERSIAAFVGLFNRLRGEKAERVKPALVKPELPVEELEPTFSASMDTEID 248

Query: 260 GGEPSMSSAPSAFEDDDEI-------RIEPRAKRRPPSPPVQIEPAMTEVPKSDRVVKER 312
              PS+        ++ ++       ++EP+ + + P PP Q EPA    P   RV  + 
Sbjct: 249 EPAPSLRRFNIHMPEERDVPDIHFEPQVEPKVELK-PEPPRQREPA----PHFSRVAAQN 303

Query: 313 QKPLFKELPDSKLPQVDLLDAAQARQETVSSDTLEMTSRMIEKKLKDFGVE 363
                         QV+ + +A+ +Q   + + LE  +R+++    D+ VE
Sbjct: 304 -------------TQVEPVSSARTQQWDATIEELEQQARLVD----DYAVE 337