Pairwise Alignments

Query, 430 a.a., Replication-associated recombination protein RarA from Variovorax sp. SCN45

Subject, 449 a.a., replication-associated recombination protein A from Vibrio cholerae E7946 ATCC 55056

 Score =  429 bits (1104), Expect = e-125
 Identities = 231/429 (53%), Positives = 296/429 (68%), Gaps = 10/429 (2%)

Query: 7   QPLAERLRPRTLGEVIGQQHLLGPGMSLRIAFESGQPHSCILWGPPGTGKTTIARLMADA 66
           +PLA R+RP+T+ + IGQQH+LGPG  LR A E+G  HS ILWGPPGTGKTT+A + A+ 
Sbjct: 15  RPLAARMRPQTVEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAANY 74

Query: 67  FDAQFLSISAVLGGVKDIREAVDLATAARDGLTQQRTIVFVDEVHRFNKSQQDAFLPHVE 126
            +A+   +SAV  GVK+IR A++   A  + L+ +RTI+FVDEVHRFNKSQQDAFLPH+E
Sbjct: 75  ANAEVERVSAVTSGVKEIRAAIE--KARENKLSGRRTILFVDEVHRFNKSQQDAFLPHIE 132

Query: 127 SGLFTFIGATTENPSFEVNSALLSRAAVYVLQSLNEDDLKQIVTRA-----QDIQAVPAI 181
            G  TFIGATTENPSFE+N+ALLSRA VY L SLN+ ++ Q + +A     + +  V A+
Sbjct: 133 DGTVTFIGATTENPSFELNNALLSRARVYKLTSLNQQEILQALHQAIADTERGLGKVAAV 192

Query: 182 DTAAV-DRLVAYADGDARRLLNTLETLAVAARAEKLSN--ISDEWLLRVLGERMRRYDKG 238
               V DRL    +GDAR  LN LE L   AR +      I    L  V GE++ R+D  
Sbjct: 193 FADNVLDRLAELVNGDARMSLNYLELLYDMAREDDQGRKQIDLPLLAEVAGEKVSRFDNK 252

Query: 239 GEQFYDTISALHKSVRGSDPDAALYWFVRMLDGGADPRYMARRLVRMASEDIGLADPRAL 298
           G+ +YD ISA+HKS+RGSDPDAALYW  RM+  G DP Y+ARRL+ +ASED+G ADPR +
Sbjct: 253 GDIWYDLISAVHKSIRGSDPDAALYWAARMISAGCDPLYIARRLLAIASEDVGNADPRGM 312

Query: 299 RLALDAAEVYERLGTPEGELALAECVVYLAIAPKSNAVYKAYNAVRALVKKDSTRPVPMH 358
           ++AL A + + R+G  EGE A+A+ +VYLA APKSNAVY A+    +         VP H
Sbjct: 313 QVALAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHNLPEFEVPPH 372

Query: 359 LRNAPTKLMKELDYGKGYRYAHDEEGGFAAGERYLPDGLEGQVFYEPVDRGLEIRIGEKL 418
           LRNAPT+LMK+L YG+ YRYAHDE G +AAGE Y P  + G  +Y+P  RGLE +I EKL
Sbjct: 373 LRNAPTRLMKDLGYGEEYRYAHDEPGAYAAGECYFPPEMSGTRYYQPTPRGLETKIAEKL 432

Query: 419 RELRRLNAE 427
             L  LNA+
Sbjct: 433 AYLADLNAK 441