Pairwise Alignments

Query, 430 a.a., Replication-associated recombination protein RarA from Variovorax sp. SCN45

Subject, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

 Score = 53.5 bits (127), Expect = 2e-11
 Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 32/220 (14%)

Query: 9   LAERLRPRTLGEVIGQQHLLGPGMSLRIAFESGQPHSCILW-GPPGTGKTTIARLMADAF 67
           LA + RP    EV+GQ H+L    +L  A    + H   L+ G  G GKTTI RL A   
Sbjct: 6   LARKWRPTRFSEVVGQSHVL---TALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAKGL 62

Query: 68  DAQFLSISAVLGGVKDIRE--------AVDLATAARDGLTQQRTIV-------------- 105
           + +    +   G     +E         +++  A+R  +   R ++              
Sbjct: 63  NCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRFKV 122

Query: 106 -FVDEVHRFNKSQQDAFLPHVES--GLFTFIGATTENPSFEVNSALLSRAAVYVLQSLNE 162
             +DEVH  ++   +A L  +E       F+ ATT+     V   +LSR   + L+ ++ 
Sbjct: 123 YLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPV--TILSRCLQFHLKPISV 180

Query: 163 DDLKQIVTRAQDIQAVPAIDTAAVDRLVAYADGDARRLLN 202
           ++++Q + +    + + + D+ A++ L   ADG  R  L+
Sbjct: 181 ENIQQQLDKVLHAEQISS-DSKALNLLAHAADGSMRDALS 219