Pairwise Alignments

Query, 430 a.a., Replication-associated recombination protein RarA from Variovorax sp. SCN45

Subject, 439 a.a., AAA ATPase, central region (NCBI) from Rhodospirillum rubrum S1H

 Score =  398 bits (1023), Expect = e-115
 Identities = 225/436 (51%), Positives = 288/436 (66%), Gaps = 17/436 (3%)

Query: 4   SAHQPLAERLRPRTLGEVIGQQHLLGPGMSLRIAFESGQPHSCILWGPPGTGKTTIARLM 63
           +A +PLA+RLRPR L EV+GQ HL+GP   L     + +  S +LWGPPG GKTTIARL+
Sbjct: 9   AAPRPLADRLRPRQLAEVVGQDHLVGPDGPLGRMTAAHRLASVVLWGPPGCGKTTIARLL 68

Query: 64  ADAFDAQFLSISAVLGGVKDIREAVDLATAARDGLTQQR-TIVFVDEVHRFNKSQQDAFL 122
           AD+ D  F  +SAV  GV D+R+   + TAAR+  T  R T++F+DE+HRFN++QQD FL
Sbjct: 69  ADSTDLHFEPLSAVFAGVADLRK---IFTAARERRTVGRGTLLFIDEIHRFNRAQQDGFL 125

Query: 123 PHVESGLFTFIGATTENPSFEVNSALLSRAAVYVLQSLNEDDLKQIVTRAQDI--QAVPA 180
           P+VE G    +GATTENPSFE+N+ALLSR  V VL+ L++  L+ ++ RA+    +++P 
Sbjct: 126 PYVEDGTVVLVGATTENPSFELNAALLSRCQVLVLRRLDDAALETLIARAEAECGRSLP- 184

Query: 181 IDTAAVDRLVAYADGDARRLLNTLETLAVAARAEKLSNISDEWLLRVLGERMRRYDKGGE 240
           +     + L A ADGD R LLN  E L +A  AE L + +   L RV+  R  +YDK  E
Sbjct: 185 LSAEGRETLRALADGDGRYLLNLAEEL-IALPAEPLLDAAG--LARVVQRRAPQYDKDRE 241

Query: 241 QFYDTISALHKSVRGSDPDAALYWFVRMLDGGADPRYMARRLVRMASEDIGLADPRALRL 300
             Y+ ISALHK++RGSD DAALYW  RML GG DP Y+ RRL R A EDIGLADP ALR 
Sbjct: 242 GHYNLISALHKALRGSDTDAALYWMGRMLAGGEDPLYLLRRLTRFAVEDIGLADPDALRH 301

Query: 301 ALDAAEVYERLGTPEGELALAECVVYLAIAPKSNAVYKAYNAVRALVKKDSTRPVPMHLR 360
           A+ A + YERLG+PEGELALA  V+YL  APKSNA YKAY A     K+  +   P+H+ 
Sbjct: 302 AVAAWDTYERLGSPEGELALANLVIYLGTAPKSNAAYKAYGAAMRAAKQTGSLMPPLHIL 361

Query: 361 NAPTKLMKELDYGKGYRYAHDEEGGFAAGERYLPDGLEGQVFYEPVDRGLEIRI------ 414
           NAPTK+MKEL Y +GY Y HD   GF +G+ Y PDG+  Q FY P +RG E  +      
Sbjct: 362 NAPTKMMKELGYSQGYAYDHDAPDGF-SGQNYFPDGMARQRFYNPPERGFEREVRKRLAW 420

Query: 415 GEKLRELRRLNAEGND 430
            +KLR  RR    G+D
Sbjct: 421 WDKLRRERRAAEPGDD 436