Pairwise Alignments

Query, 309 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  145 bits (367), Expect = 2e-39
 Identities = 93/297 (31%), Positives = 157/297 (52%), Gaps = 14/297 (4%)

Query: 6   QQIINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKDGMPNTP 65
           Q I  GL LGS+  L A+G  + +G++ +IN AHGE++M+GA T++ +  +++   P+  
Sbjct: 243 QNIWYGLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLF 302

Query: 66  GWLILLIALVIACIVAATLNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAMIIWKP 125
            W  L IAL +A +V   +   +E+   R L   P L  L+   G+S++LQ     I+ P
Sbjct: 303 EW-SLAIALPLAFLVTGAVGLALERGVIRFLYGRP-LETLLATWGISLILQQTVRTIFGP 360

Query: 126 TNKAYPN-LLPTDPIHVAGAVISPTQVMILSVTAFSLVVLMWLVNYTKLGRAMRATAENP 184
           TN+   N    +    + G  I+  ++ I+         L++L+  T +G  MRA  +N 
Sbjct: 361 TNREVGNPSWMSGAFELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNR 420

Query: 185 RVAALMGIRPDMVISATFIIGAVLAAIAGVMYASNYGIAQH-AMGFLPGLKAFTAAVFGG 243
           R+A+ MGIR   V + TF +G+ +A IAGV  +    ++ +   G++  + +F   VFGG
Sbjct: 421 RMASSMGIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYI--IDSFMVVVFGG 478

Query: 244 IGNLAGAVVGGILLGLIEAIGSGYIGTITGGVLGSNYSDIFAFIVLIVMLTLRPSGL 300
           +GNL G +VG   LG++      Y G + G +L          +++I+ +  RP GL
Sbjct: 479 VGNLWGTLVGAFSLGILNKFLEPYAGAVLGKIL--------VLVLIILFIQKRPRGL 527