Pairwise Alignments

Query, 354 a.a., 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like from Variovorax sp. SCN45

Subject, 405 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella amazonensis SB2B

 Score =  111 bits (277), Expect = 4e-29
 Identities = 92/342 (26%), Positives = 152/342 (44%), Gaps = 59/342 (17%)

Query: 30  ILAAGIRQGIGLPYGCKDGA-CGSCKCKKLSGEVTLGPHQSKALSAEEQLAGFVLTCCAH 88
           +L A   + I +P  C  G  CG C+ K  SG   + P +   ++ +E   G  L C   
Sbjct: 54  LLGALAGKNIFVPSACGGGGTCGQCRVKVKSGGGDILPTELDHITKKEAKEGCRLACQVA 113

Query: 89  ATSDVVLESRQVTEAGALPIRKMPVRVMALTRQSHDVMLVRLQLPAGEPLQFYAGQYVEF 148
             SD+ LE     +     ++K    V++    +  +  + L++P GE + F AG Y++ 
Sbjct: 114 VKSDMDLE----LDDEIFGVKKWECEVISNRSTATYIKELLLKVPEGEEVHFKAGGYIQI 169

Query: 149 ----------------ILRDG----------------ARRSYSMANAPHTVGVPGTGIEL 176
                           I RD                   R+YSMAN P   G     I L
Sbjct: 170 EAPAHEVHYKDFDIPEIFRDDWEKYGLFNLVSRVDSEVMRAYSMANYPEEQG----RIML 225

Query: 177 HLR-------HLPGGKFTDHVFGTMKEKEILRIEGPFGSFFLREDSDKPMVLLASGTGFA 229
           ++R        LP G+ + ++F  +K  + + I GPFG FF++E +D  MV +  G G A
Sbjct: 226 NVRIATPPSPELPPGQMSSYIFN-LKPGDKVIISGPFGEFFVKE-TDAEMVFIGGGAGMA 283

Query: 230 PIKA-LLEHMQFKGITRPVSLYWGGRRPEDLYMDAWVREQMAQMPQLRYVPVISNATPQD 288
           P+++ + + ++    +R +S ++G R   +++         AQ P   +   +S   P+D
Sbjct: 284 PMRSHIFDQLKRVKTSRKMSFWYGARSLREVFYQEDFDGLAAQNPNFEWHIALSEPLPED 343

Query: 289 NWTGRTGFVHQAVLEDFADLSGH------QVYACGAPIVVDS 324
           NWTG TGF+H  + E++  L  H      + Y CG PI+  S
Sbjct: 344 NWTGYTGFIHNVLYENY--LKQHKAPEDCEFYMCGPPIMNSS 383