Pairwise Alignments

Query, 414 a.a., RND efflux system, membrane fusion protein from Variovorax sp. SCN45

Subject, 373 a.a., acriflavin resistance protein from Sinorhizobium meliloti 1021

 Score =  202 bits (513), Expect = 2e-56
 Identities = 136/387 (35%), Positives = 207/387 (53%), Gaps = 20/387 (5%)

Query: 20  LACALAIGLLGAIAGCSGSSSSSSALPGAPQGLAAAQVGVVTVQPENQPVTTELSGRTRS 79
           LA AL+ GLL  I   +G++ +    P       A  V    +    + V  +L+G+  +
Sbjct: 7   LAAALSCGLLTTIGIVAGNAYAQQPPP-------AVNVAPAAIMDLRESV--DLTGKVVA 57

Query: 80  RLSAEIRPQVGGIVQQRLFEEGALVKAGQVLYQLDPASYKAAYASAQASVAKSEATVNAA 139
               +IR +V G +++  FE+G  V AG VLYQ++  +Y+AA      S+A +EA  + A
Sbjct: 58  VQKVDIRARVSGFLEKVNFEDGQKVSAGTVLYQVEDGAYRAALQEIDGSIAAAEAQRDLA 117

Query: 140 KVTARRNAELAKIEAVSKQTSEDSQATLQQAEADLGVARAALETARINLGFTRITAPIAG 199
            +   R   L     V++ T + + A +++AEAD+   + + + A +NL +T+I AP  G
Sbjct: 118 VLERDRAQRLIATNTVAQATLDTANAQVKKAEADILRLKGSKQNAELNLSYTKILAPFDG 177

Query: 200 RIEASTVTPGALVTASQTTALTTVQQLDPVYVDVTQSTTELLQLQRELAAGTLKNGSADK 259
            +  +TV  GALV A  + +L T+ +LDP+YV+   +T+     +  +  G + +G    
Sbjct: 178 VVGLTTVDVGALV-APDSGSLVTLTRLDPIYVEFPVATSLYFSYRERVEKGEMSSG---- 232

Query: 260 AEASVKLLLEDGTTYAHAGRLQFSSVTVNEGTGAVTLRILVPNPERTLLPGMYMRAVLEQ 319
             A+V + L +GT Y   G + F + TV++GT  VT+R   PNP  TLL G  +R VLEQ
Sbjct: 233 --ANVSITLPNGTDYPEKGTIDFVASTVSQGTDTVTVRAEFPNPGGTLLDGTLVRVVLEQ 290

Query: 320 GVAEGALLVPQQGVTRTANGDASALVVTSENKVEKRALKVSRAVGNRWQVIEGLKAGERV 379
              +  L VPQQ V R   G A  +VV + +KVE R + VSR+   +  V +GLK GE V
Sbjct: 291 SDPQDVLAVPQQAVQRDQQG-AFVMVVDANSKVELRRVDVSRSSRGQAVVAKGLKEGENV 349

Query: 380 IVEGSLKVKAGDTVKAVDAAGATTVAG 406
           I EG  KV+ G     VDA  ATT  G
Sbjct: 350 ITEGVGKVRPG---IVVDAVAATTTGG 373