Pairwise Alignments

Query, 295 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (289), Expect = 9e-31
 Identities = 86/297 (28%), Positives = 147/297 (49%), Gaps = 8/297 (2%)

Query: 2   VSPRLPSTQGLQAFEAVARLRSVNLAAEELSVTPSAVSHRIRQLELLLELKFFTGGDFS- 60
           +S RLP    L+ FEA AR  S   AAEEL VT +AVSH+I+ LE  L LK F   + S 
Sbjct: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60

Query: 61  -LSADGMAYLARVREAIAALQQVPGR-EPASQVRRLRLAVTPTFSRQMLLPRLARFRDTY 118
            L+ +G +Y   +++  ++L +   +    S+   L +++ P+F+ Q L+PRLA F    
Sbjct: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120

Query: 119 PNIELMLQVTAPMRNATPEEADLELRFGTGPFHDREFCQLLADEVSPACSPAYLQRHGPF 178
           P+I++ ++       +  ++ D+ + +G G +      +L  + + P CSPA L  + P 
Sbjct: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180

Query: 179 EGGFATDAEVSRAQLLR-TPLESWRTWFKACGVGLPEPATGHQFTDLGLALDAAAEDFGV 237
           E      ++++   LL  T  + W+ + K  G+       G  F+   + L AAA   GV
Sbjct: 181 E----KLSDLAYHTLLHDTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGV 236

Query: 238 VLMHLKLGSAWLDNGRLVRLSPRSVPSPNAYFLCWRPGTMERWECATFVEWLRQALR 294
            L +  L    +D GRL+      + + NA+++       +    ATF +W+ +  R
Sbjct: 237 ALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKAR 293