Pairwise Alignments

Query, 295 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 303 a.a., glycine cleavage system transcriptional activator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  122 bits (305), Expect = 1e-32
 Identities = 88/292 (30%), Positives = 142/292 (48%), Gaps = 8/292 (2%)

Query: 2   VSPRLPSTQGLQAFEAVARLRSVNLAAEELSVTPSAVSHRIRQLELLLELKFFTGGDFS- 60
           +S RLP    ++AFEA AR  S   AAEEL VT +AVSH+I+ LE  L LK F   + S 
Sbjct: 1   MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL 60

Query: 61  -LSADGMAYLARVREAIAALQQVPGREPA-SQVRRLRLAVTPTFSRQMLLPRLARFRDTY 118
            L+ +G +Y   +++    L     R  A S +  L ++++P+F+ Q L+PRL++F +  
Sbjct: 61  LLTEEGQSYFLDIKDIFIQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLSKFSEKN 120

Query: 119 PNIELMLQVTAPMRNATPEEADLELRFGTGPFHDREFCQLLADEVSPACSPAYLQRHGPF 178
           P I++ ++      ++  ++ D+ + +G G +      +L  + + P CSP  L    P 
Sbjct: 121 PEIDVRIKAVDTEASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPMLLNGPKP- 179

Query: 179 EGGFATDAEVSRAQLLR-TPLESWRTWFKACGVGLPEPATGHQFTDLGLALDAAAEDFGV 237
               +   ++    LL       W+ WF+ CG+       G  F+   L L AAA   GV
Sbjct: 180 ---LSKPEDLKHHTLLHDMSRHDWQAWFRQCGITDINVNQGPIFSHSSLVLQAAAHGQGV 236

Query: 238 VLMHLKLGSAWLDNGRLVRLSPRSVPSPNAYFLCWRPGTMERWECATFVEWL 289
            L +  L    +  GRLV      + S +AY+L  +    E  +   F EW+
Sbjct: 237 ALGYSVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWM 288