Pairwise Alignments

Query, 336 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 309 a.a., transcriptional regulator, AraC family from Pseudomonas syringae pv. syringae B728a

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 79/312 (25%), Positives = 131/312 (41%), Gaps = 25/312 (8%)

Query: 27  AEP--PQRQLEAWRERVGHVIDVVPSSAGIGKPFQAAIDRYEVGDIVFTDCRSDAMLLER 84
           AEP  P+ + +AW+E V     +V S      PF   ++    G + FT  +S  +   R
Sbjct: 7   AEPLRPEDRFDAWQEVVSSTYGLVASQPLNEAPFDGRLNVRGQGSVTFTRIQSSPLHYRR 66

Query: 85  SLARISTDNVRNFAFHVFAEGDVDSVTVRSSAQRDAPAAAKLVALDMGQPVRMHRNACRV 144
                 +D+     F +      D++ V++  +     A  +V  D  QP      ACR 
Sbjct: 67  LQQDRESDH-----FLLTLSLCPDALVVQNDRE-SRQGAGDIVLYDSAQPY-----ACRY 115

Query: 145 ------LSFFVPGTMLQEVFPDPAAVHARTMQPDSPIARLALDHAAALGR--EIATLSAP 196
                 +   VP  +L +  P    +  RT+   S + R+A   A  L        LS P
Sbjct: 116 PEGDDQIVLTVPRKLLLQHIPSAERLVCRTLDGHSALGRVA---AVVLTEAWNAEGLSDP 172

Query: 197 AAEGAVRDAVQLLVASFGKQARLSGGARAAARAAMFGQVRRYVQANLHRADLSPENVLAA 256
            +E      + +L  +F      +   R + +     ++++++  NL    L+ EN+  A
Sbjct: 173 LSERLNASLLDVLSTAFDSVFGDTDIRRQSHQMQQLQRIKQFLLNNLPDTGLTAENIALA 232

Query: 257 LHLPRPTLYRLFQHEGGLGA-YIRHLRLRHAADDLVRYPHLMVTDVAYGVGFKSPSDFTR 315
            H+   TL RLF  EG     ++   RL    D L++     V+D A   GF + S F+R
Sbjct: 233 THVSPRTLNRLFAREGTTAIRWLWQQRLSACHDALLKRHVRRVSDAALNFGFTNLSHFSR 292

Query: 316 AFRRAYSMSPQE 327
           AF+ AY + PQ+
Sbjct: 293 AFKNAYGIPPQQ 304