Pairwise Alignments

Query, 336 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 316 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 69/262 (26%), Positives = 107/262 (40%), Gaps = 30/262 (11%)

Query: 80  MLLERSLARISTDNVRNFAFHVFAEGDVDSVTVRSSAQRDAPAAAKLVALDMGQPVRMHR 139
           M    ++ R+   + R+     F  G V  +   SS++ D P    +V L +  P     
Sbjct: 77  MAYNGTIQRMERRSGRSVESGTFRRGVVIIIPAGSSSRWDIPKPVDVVQLYL--PHTTLT 134

Query: 140 NACRVLSFFVPGTMLQEVFPDPAAVHARTMQPDSPIARLALDHAAAL--GREIATLSAPA 197
                   F P  +L+           RT  PD   +RL L  A  L   R + TL    
Sbjct: 135 RIAEATDTFTPTDLLE-----------RTAHPDPITSRLLLSAADVLEGNRALDTLFRQQ 183

Query: 198 AEGAVRDAVQLLVASFGK----QARLSGGARAAARAAMFGQVRRYVQANLHRADLSPENV 253
               +  A +LL A  GK    Q  + G A    R A+  ++R    A++  A L+ ++ 
Sbjct: 184 LTDLL--ATRLLAAHTGKAPSYQPAVGGLAPNVLRRAI-ERLRSDSDADVSLAALAADSG 240

Query: 254 LAALHLPRPTLYRLFQHEGGLGAY--IRHLRLRHAADDLVRYPHLMVTDVAYGVGFKSPS 311
           L+  H       R F+   GL  +  +R  RL  A + ++R P   V  VA  +G+ S +
Sbjct: 241 LSRFHF-----CRAFKESTGLSPHNWLRQYRLEQAIN-MLRNPANSVASVAASLGYNSQT 294

Query: 312 DFTRAFRRAYSMSPQEFRASSG 333
            F  AFR+    +P E+R S G
Sbjct: 295 AFAAAFRKLTGETPTEWRRSHG 316