Pairwise Alignments

Query, 292 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 290 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 68/243 (27%), Positives = 126/243 (51%), Gaps = 12/243 (4%)

Query: 4   TVDQLRQFVTTAECGSFSAAARHLGKAQSAVSTAIGLLEVDLGVALFDR-SRRNAQLSEA 62
           T ++L+  V+ A+ GSFS AA+ LG + +AV+ AI  LE DL + LF+R   +  QL++ 
Sbjct: 4   TTERLQYIVSVAQHGSFSGAAKELGVSVAAVNKAIQHLEFDLELTLFERHGGKKPQLTQE 63

Query: 63  GQVLLLEARELLRQAEQLDQRARSLNAGSEAALSLALDEALPYTAIATLLREISVKFPSL 122
           G+ L ++A E+L +   ++++A+ ++ G E+ LS+ L     Y     L+ E++ ++P L
Sbjct: 64  GKRLYVKALEILPKLIAMERQAQMMSEGIESQLSICLHPYTCYPKYTQLIGELAARYPDL 123

Query: 123 ELTLLNGTATEVADYVEQERASVAFHFDRGAVRACFDQRHIGTVPQGVFVASGHPLADGR 182
           E+ ++     E  D+ +  +  +    +R A     + + I  +   +  A  HPLA  R
Sbjct: 124 EINIVE---AETLDW-QNLQCDIIIAPNRLANLRGVNIQTISRIKWLLVSAPQHPLAQLR 179

Query: 183 TV-RRQDLVRHRQLLMHADDV------HEVAYSPKVWRSDSFYSTAEMVADNLGWAVLPL 235
           +    +D   H QL+  A ++        + YS K+   + FY   E++    G+A+ P 
Sbjct: 180 SAPELEDFDHHHQLMPPAGNIILPHYLEVMRYSSKLVTVERFYQLRELLLAGCGFAMYPQ 239

Query: 236 NIA 238
            +A
Sbjct: 240 ALA 242