Pairwise Alignments

Query, 341 a.a., T6SS component TssG (ImpH/VasB) from Variovorax sp. SCN45

Subject, 338 a.a., type VI secretion system baseplate subunit TssG from Vibrio cholerae E7946 ATCC 55056

 Score = 93.2 bits (230), Expect = 9e-24
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 15/272 (5%)

Query: 55  PSLSFAPASFSRFEPATAHSPPR--LRQQFFGYIGPNGPLPVH-LSDFIRERSLNHGDPT 111
           PSL F+P+     E   A    R  +   FFG  G   PLP   L   + E    +  P 
Sbjct: 65  PSLGFSPSDVMALE---ARDDERWVMLTNFFGLSGAQSPLPGFILEQLVTEEPGGYKQP- 120

Query: 112 WLAFLDSFSHRFSLHFYRAWAQSRPAVALDRPGEDRFRLQVGALVGIGTPGRVARDQIHD 171
              FLD F++R     YR W + R  V      +D F  Q+ ALVG+G P       I+ 
Sbjct: 121 ---FLDFFNNRLINLVYRVWRKYRYYVRFQPGAQDVFSAQLFALVGLGDPDLRGETPINW 177

Query: 172 DARLHFSGWLARRVHNAESVESVLCSYFGVP-VKLERWVGHWMSLPAAELTRLGRGESSR 230
              L ++G LA R  + + V  ++   F +P V + +WV   +S+  ++  +L  G+ + 
Sbjct: 178 CKMLAYAGTLAGRSRSPQVVAGIIAHCFDLPDVSIRQWVRRRVSIDRSQ--QLALGKQNA 235

Query: 231 SMGMGAMLGTRAWDRQHRVRLHLGPLTLEQYRMFLPTGDARAVLQRWMLQLLGGELEWDA 290
            +GM  ++G    D   +  + +  L+  ++  FLP+G     L + +  +L  ++ +D 
Sbjct: 236 RLGMDTVIGESVIDCSGKFIICIKRLSRSRFADFLPSGKEYQPLCKLVEFILREQMAYDL 295

Query: 291 ELVLQKQQVPATRLGEAKGNGPRLGWVSWLGQ 322
           EL + +++ P   L   +     LGW S+LGQ
Sbjct: 296 ELAMDEREAPLFCLDTRQNIA--LGWTSFLGQ 325