Pairwise Alignments

Query, 909 a.a., T6SS AAA+ chaperone ClpV (TssH) from Variovorax sp. SCN45

Subject, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

 Score =  530 bits (1366), Expect = e-154
 Identities = 331/892 (37%), Positives = 486/892 (54%), Gaps = 60/892 (6%)

Query: 20  AIEGATVFCKMRGNPYVELEHWFAQLLQAQDSDLHRVIQHYGLDVSVIAKDMTAALDRLP 79
           AI  A      R + Y+E  H    LL    S +  ++    +DV  +   +   LDRLP
Sbjct: 13  AISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQLRSKLGEMLDRLP 72

Query: 80  R-----GATAISDFSPHIENAIERAWTYATLQFGEAQVRTGYILVGMLKTQSLRNPLFGL 134
           +     G   +S     + N  ++       +  +A + +   L+  ++    + PL  L
Sbjct: 73  KVSGIGGDVQLSSALGSLFNLCDKV----AQKRQDAYISSEIYLLAAIED---KGPLGHL 125

Query: 135 SKQFEKVKVEDLADNFAKICDASPEAQMRAQDGTGMGSGAPGEDAGAMAPAAMGKGDALK 194
            K+F   +         K+ +A  + +           G    D     P A     AL+
Sbjct: 126 LKEFGLTE--------KKVSEAIEKIR----------GGQKVND-----PNAEELRQALE 162

Query: 195 KFAVDLTEKAKKGEMDPVTGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVEGFAQR 254
           KF +DLTE+A++G++DPV GRD+EIR+ + +L RR +NNP++ GE GVGKTA+VEG AQR
Sbjct: 163 KFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQR 222

Query: 255 LARGDVPPQLKDVKLLTLDIGLLQAGASMKGEFEQRLRQVIDEVQSSPTPIILFIDEIHT 314
           +   +VP  L+  ++L+LD+G L AGA  +GEFE+RL+ V++E+      IILFIDE+HT
Sbjct: 223 IINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHT 282

Query: 315 LVGAGGAAGTGDAANLLKPALARGNLRTIGATTWAEYKKYIEKDPALTRRFQVVQVPEPD 374
           +VGAG   G+ DA N+LKPALARG L  +GATT  EY++YIEKDPAL RRFQ V V EP 
Sbjct: 283 MVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPT 342

Query: 375 EQKAILMLRGVASVLEKHHRVQLLDEAIEAAVKLSHRYIPARQLPDKAVSLLDTACARVA 434
            +  I +LRG+    E HH V++ D AI AA  LSHRYI  RQLPDKA+ L+D A + + 
Sbjct: 343 VEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIR 402

Query: 435 VSQHATPPEVEDCMRRIEGLTVEQEIIGREEAIGIDVTKRAAQVAALLAESKVQLDALNA 494
           +   + P  ++   R+I  L +EQ+ +  E     +  KR A +   L E +     L  
Sbjct: 403 MQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASE--KRLAILNEELQEKERDYAELEE 460

Query: 495 RWQEEKGLVDRLLELRAKLRAGNKPVDSVKADGDAKADVPPPQPSPSGGGSEDRAALLAE 554
            W+ EK  +     ++A L      ++  +  GD                SE +   + E
Sbjct: 461 VWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNR------------MSELQYGRIPE 508

Query: 555 LH-ELQAKIHAVQGESPLILPSVDEQAVASVVADWTGIPVGRMVKNEVEAVLKLADTLNQ 613
           L  +L     A   E  L+   V +  +A V++  TGIPV +M++ E E +L++ D L++
Sbjct: 509 LEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHK 568

Query: 614 RVIGQKHGLEMIARRIQTSRARLDNPQKPIGVFMLCGTSGVGKTETALALAEALYGGEQN 673
           RVIGQK  +E++A  I+ SRA L +P +PIG F+  G +GVGKTE    LA  L+  E  
Sbjct: 569 RVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA 628

Query: 674 IITINMSEFQEAHTVSTLKGAPPGYVGYGEGGILTEAVRRRPYSVVLLDEVEKAHPDVHE 733
           ++ ++MSEF E H+V+ L GAPPGYVGY EGG LTEAVRR+PYSV+LLDEVEKAHPDV  
Sbjct: 629 MVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFN 688

Query: 734 IFFQVFDKGWMEDGEGRMIDFKNTIILLTTNAGSELVMSMCRDPELLPDSNALADALKAP 793
           I  QV D G + DG+GR +DF+NT++++T+N GS    S  ++     D   + + +   
Sbjct: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS----SRIQENFARLDYQGIKEQVMDV 744

Query: 794 LMKVFPPALLGRI-VTIPYYPLSPDMMKKIVRLQLGRIKKRVEANHGVPFDYSDAVVDQV 852
           + K F P  L R+  ++ ++PL  + +K I  +QL R+++R+ A      +  D  +D +
Sbjct: 745 VSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRL-AERDYQLEVDDEALDLI 803

Query: 853 VARCQDPESGGRVID-AILTNTVLPTISVEYLQRLASGGEIRRVALDVKDAD 903
                DP  G R +  AI  N   P        +   G  I    L VKD +
Sbjct: 804 AHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLPGSPI---LLSVKDGN 852