Pairwise Alignments

Query, 791 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 572 a.a., type IV secretion protein Rhs from Klebsiella michiganensis M5al

 Score =  186 bits (471), Expect = 4e-51
 Identities = 112/313 (35%), Positives = 167/313 (53%), Gaps = 19/313 (6%)

Query: 396 TVMPADRPFRAPRLTPRVTMPGPQTAIVVGPKGDELHVDDHGRVKVHFHWDRYDESDEKS 455
           T +P   P+  P  TP+  MP  QTA VVG  G+E+  D  GRVKV F W+R  ++DE  
Sbjct: 275 TAIPKATPYHPPCATPKPFMP-TQTATVVGKNGEEIWTDKLGRVKVQFPWEREGKNDEIG 333

Query: 456 TCWVRVSQPWAGKGWGGYFAPRIGQEVIVDFLNGDPDRPIIMGRVYNDDQPIPF---KSH 512
           +CW+RV+  W+G G+G  F PRIGQEV+V F++GDPD+P+I G VYN    +P+    + 
Sbjct: 334 SCWLRVATAWSGNGFGAQFIPRIGQEVVVSFIDGDPDKPLITGCVYNGANALPYALPANQ 393

Query: 513 TQSGFRTRSTPKGNAANFNEFRFEDDKGKEQVYLHAERNLDVEVEADETRNVGHDRTKTV 572
           TQSG +T S        FNE RF+D K  E + + A+++  V V  D T  VGHD   +V
Sbjct: 394 TQSGIKTHS-----EQGFNELRFDDKKDAELLAMQAQKDFQVTVLNDSTTIVGHDEILSV 448

Query: 573 GHDEKVKIKNDRTEEVTGNETITIHGKRELTVDKDQYVTIKTNHSEEVTGWKSTWVTGNH 632
            +   V +K D+   + GNET  + G   L VD +  +TIK + +  +   K+  +    
Sbjct: 449 KNKRSVTVKGDQEHAIDGNETHKVKGNYTLNVDGN--LTIKVSGTLTLESGKTLDIKSGA 506

Query: 633 RLSTSANHDQTVQGNETIDVSGTRSDTVVGAVTQKVGPFTQTVTGAMTVTAAGPITFNAP 692
            L+ SA+      G+  +D +   S+    +++QK    +Q     +T  A+   T +  
Sbjct: 507 GLNASAS------GSMKLDAASIASE-AKSSLSQKAVTISQEARATLTSKASATQTVDG- 558

Query: 693 AGFTVVAPGGTKI 705
            G  V+  G  KI
Sbjct: 559 GGMLVIKGGLVKI 571



 Score = 71.6 bits (174), Expect = 1e-16
 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 6/160 (3%)

Query: 93  YRITLRSWFWLLTKRTNSRILQEKKVLEVLDAVFEDSPIKRFKKTRADNVIGTHNPRRYC 152
           Y+  LR W W LT  +N+R+ Q     E+++ VF+D     +K             R YC
Sbjct: 79  YQFVLRPWLWWLTLSSNNRVFQNLNAQEIVEKVFKDGGFTDYKFQLKSKPA----KREYC 134

Query: 153 VQHQESDYGFLSRLLEDEGIYYWFDAHGAPGTMHLSDASDIAHEKLPANDTLHHMATDAS 212
           +Q++ESD+ F+SRLLE EGI+++F       T+ L+D  + A   +P    + + A   +
Sbjct: 135 LQYKESDFNFVSRLLEQEGIFWFFTHKEGKHTLVLAD-DNSACPPIPGEKKVKYQAAQ-N 192

Query: 213 EARFNEVSRWVSGRQFGTGKHASRDSDFKAIKKKLGADAD 252
             R   + R    R   T + A   +D     K+L  ++D
Sbjct: 193 GGRETGMIRSAQLRLQATAQGAHPGNDKSEQPKQLIGESD 232