Pairwise Alignments

Query, 351 a.a., Pentapeptide repeat family protein from Variovorax sp. SCN45

Subject, 223 a.a., pentapeptide repeat-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 61/175 (34%), Positives = 77/175 (44%), Gaps = 21/175 (12%)

Query: 158 GCDLKRAAFSGTEFSTVVFLKSDLSGHSFAGQRFATCQFME-ADLRGCDFSRAQLAKGNF 216
           G DL+   F    F    F ++DL+        F  CQF+E  DL GCDFS A L    F
Sbjct: 20  GKDLQGLLFRRCRFVRCSFNRADLTDC-----HFKQCQFVEPGDLLGCDFSYATLINAKF 74

Query: 217 QKARLAGASFEGAEAANAIFMDADLAGARFDRANLVQAIFIGARAADSSFASANLHQSN- 275
              RL  A F GA    A F  ++L GA F RA+    I I      + F+  NL   N 
Sbjct: 75  SDCRLNLARFTGARCFGAEFRASNLQGADFYRASFANQIGINHYFCSAVFSGCNLAYGNL 134

Query: 276 --------------WTGAALPGARLDGCELTYADFSHADLRRADLRGASMFRSNL 316
                         W GA L GA L G +L+  +FS       DLRGA++ R +L
Sbjct: 135 SQVILEECELTDNRWRGANLTGASLKGSDLSGGEFSPELWGEFDLRGANLTRVDL 189



 Score = 62.8 bits (151), Expect = 8e-15
 Identities = 53/216 (24%), Positives = 82/216 (37%), Gaps = 14/216 (6%)

Query: 12  LAEPVLEADLSGMDFTGEDLSATVFDGCRFDDARLAGADLCESVFIRCSFARTSMERSRM 71
           L    LE D    DF+G+DL   +F  CRF       ADL +  F +C F    +E   +
Sbjct: 4   LQHETLERDYFEHDFSGKDLQGLLFRRCRFVRCSFNRADLTDCHFKQCQF----VEPGDL 59

Query: 72  TGASFAECTVQRAVMADVDMKSVAFFQCTVEGLAMNASRLASVSFVKSKLDGLLFRQGRL 131
            G  F+  T+  A  +D  +    F      G    AS L    F ++     +      
Sbjct: 60  LGCDFSYATLINAKFSDCRLNLARFTGARCFGAEFRASNLQGADFYRASFANQIGINHYF 119

Query: 132 SQVTMVDCETGVLDFAKASLDSCVLMGCDLKRAAFSGTEFSTVVFLKSDLSGHSFAGQRF 191
                  C     + A  +L   +L  C+L    + G   +      SDLSG  F+ + +
Sbjct: 120 CSAVFSGC-----NLAYGNLSQVILEECELTDNRWRGANLTGASLKGSDLSGGEFSPELW 174

Query: 192 ATCQFMEADLRGCDFSRAQLAKGNFQKARLAGASFE 227
                 E DLRG + +R  L   + ++  L G   +
Sbjct: 175 G-----EFDLRGANLTRVDLEGLDPREVALEGVMID 205