Pairwise Alignments

Query, 157 a.a., KEGG: type VI secretion system secreted protein Hcp from Variovorax sp. SCN45

Subject, 166 a.a., Protein of unknown function DUF796 from Pseudomonas syringae pv. syringae B728a

 Score = 92.8 bits (229), Expect = 2e-24
 Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 7/155 (4%)

Query: 3   DCHFKIDGVKGEAVHKDHKEEIELMSWSWNVHNA---TCTVGGGSSVGKGSPGMVTLTKK 59
           D + KIDG+ GEA+    K+ IE+ ++      +   T T  GG++ G+     +   K 
Sbjct: 4   DAYLKIDGIPGEALDAQFKDWIEMENFDLGASQSASVTATSAGGATSGRARMSDLFFRKT 63

Query: 60  FDSASPTLAKACANGKHFDKATLVMAKSGEGQQTFMTITFKEVRIADFNVS---AAQGGE 116
            D A+P L +AC +GKHF + TL + ++G  +  ++ I  +EV I+  +++     +GG 
Sbjct: 64  VDKATPKLHEACCSGKHFKEVTLAVNRAGTDKLKYLEIVLEEVIISSVSLNGNGGVEGGF 123

Query: 117 VHESVAVSYGDIEIAYKPQK-ADGTMGGDIKFGWD 150
             E+V ++YG I++ Y  QK ADG  GG +  GWD
Sbjct: 124 PTETVRLNYGRIKMTYTQQKRADGQGGGQVVGGWD 158