Pairwise Alignments

Query, 225 a.a., Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain from Variovorax sp. SCN45

Subject, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 89.7 bits (221), Expect = 4e-23
 Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 27/216 (12%)

Query: 3   ILIADDHRLVIEAVKAKLSELEPGI----EFVLAMSVDELLAGATDDLDLALIDLNMPGA 58
           I + DDH +V     A+L  LE  I    E+  A +    L  A  ++D+A+ID++MP  
Sbjct: 4   IALVDDHTIVRSGF-AQLLNLEQDIRVQGEYESAKAAFYALTQA--EVDVAIIDISMPDE 60

Query: 59  DGQAHIDVIRQRHPAVPVMVLSGYEDPAIMRSALERGVLGFIPKAYSPDVMLSAVRLVLA 118
           +G + ++ +RQ +P    ++LS Y+  + ++ AL+ G  G++ K   P  ++SA+R V +
Sbjct: 61  NGLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVAS 120

Query: 119 GGVYVPPMMLTALPPGIVAGVVPQAAEALSSRGGSQTLEHLRNVLTERQVEVLQLLSQGK 178
           G  Y+                    A+AL +   +  + ++   LT+R+VEV  LL QGK
Sbjct: 121 GRRYL-------------------CADALVNL-SNPDINNVLADLTKREVEVFDLLVQGK 160

Query: 179 PNKLIGRSLGISEGTVKIHLAAIFRALNVRNRTEAV 214
             K I ++L +S  TV +H A I   LN+ N  + +
Sbjct: 161 EVKEIAQTLFLSHKTVHVHRANILSKLNLTNNVDVI 196