Pairwise Alignments

Query, 314 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (421), Expect = 5e-46
 Identities = 98/286 (34%), Positives = 158/286 (55%), Gaps = 7/286 (2%)

Query: 8   LTPDALAMLQTVAATGSFAAAARTLDLVPSALSYRVRQIEDALDVLLFDRSARQARLTEA 67
           +T +AL +L  +   GSFAAAA  L+  PS+LSY+++++E  LD+++FDRS  +A  TEA
Sbjct: 5   ITLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRANFTEA 64

Query: 68  GAELLREADRLLDEIDAVANRVKRVATGWEPMLTIAVDSVIARDPLLDLATAFFALEPPT 127
           G  +L     +L   + + N    +A GWE  +TIA+D ++    L  +  A   +   T
Sbjct: 65  GKLILERGRAILAATEKLVNDATLLANGWELDITIALDGIVPAANLFPMVEALGNIS-KT 123

Query: 128 RLKLRDETLLGTIEALTSGEADLAIGAVLDAASLAFTATGIRSRLIGELRFVYAVAPHHP 187
           R++++DE L G  EAL +G ADL I   ++A         +++  IG ++ ++  AP H 
Sbjct: 124 RVRIQDEILAGCWEALATGRADLLICPRIEA-----LPQDVKAETIGTMKMIWVAAPTHY 178

Query: 188 LARLPQPLSDAAMREHRAVAAADSTRHGTPMTVNLIGGQDVLTVPSMQAKIAAQLHGLGG 247
           + R     ++ A  ++RA+A AD+ R    M+VN++  Q  LTV ++ AK  A + GLG 
Sbjct: 179 VHRRSGEFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGI 238

Query: 248 GFLPEPMARPYIEAGHLVELKTERRPPLGSLHCAWRAGKPGRALEW 293
           G LP  +A+PYI+ G L  +       +  +  AWR  + G A  W
Sbjct: 239 GTLPLQVAQPYIDKGELKAIHGSEDLEM-DIVLAWRRNQMGEAKSW 283