Pairwise Alignments

Query, 314 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 298 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 18/275 (6%)

Query: 8   LTPDALAMLQTVAATGSFAAAARTLDLVPSALSYRVRQIEDALDVLLFDRSARQARLTEA 67
           +T + L M  TVA  GS  AA+  L     A+S  ++Q+E  LDV+LFDR   +  LT+ 
Sbjct: 1   MTLEQLLMFNTVALAGSLKAASDKLHKTQPAISQSIKQLESQLDVVLFDRQGYRLALTQE 60

Query: 68  GAELLREADRLLDEIDAVANRVKRVATGWEPMLTIAVDSVIARDPLLDLATAFFALEPPT 127
           G +LL+ A R+L+E   +    K +A G E  +T+A ++      +L +        P T
Sbjct: 61  GRKLLQYAQRVLNEAQEMRQVAKHLAIGNEASITLAFEASFNLARILPMLERTQLEFPHT 120

Query: 128 RLKLRDETLLGTIEALTSGEADLAIGAVLDAASLAFTATGIRSRLIG--ELRFVYA---- 181
           ++ L+ E L G +EAL  G+AD+AI           +A GI S      EL F+++    
Sbjct: 121 QIILKQEYLTGALEALNQGKADIAI-----------SAGGIESMRSNHFELGFLFSGSLL 169

Query: 182 -VAPHHPLARLPQPLSDAAMREHRAVAAADSTRHGTPMTVNLIGGQDVLTVPSMQAKIAA 240
            VA    L+R P       +     +   D+      +   +  GQ    V     K   
Sbjct: 170 DVASPRLLSRYPSLSHVKELVNEYQIVIQDTGTGTANIEFGVQAGQRRWYVNDFYTKKML 229

Query: 241 QLHGLGGGFLPEPMARPYIEAGHLVELKTERRPPL 275
              G+G G LP  M    +  G L  L+ + R  L
Sbjct: 230 IQSGMGWGKLPYYMVEEALANGSLHPLELKERQNL 264