Pairwise Alignments

Query, 203 a.a., Transcription antitermination protein NusG from Variovorax sp. SCN45

Subject, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

 Score =  229 bits (583), Expect = 3e-65
 Identities = 107/176 (60%), Positives = 138/176 (78%)

Query: 27  PDLRWYVVHAYSGMEKAVERNITERINRAGMQDKFGRILVPTEEVVEIKNGQKRTTERRF 86
           P  RWYVV A+SG E  V +++ E I   GM++ FG +LVPTEEVVE++ GQ+R +ER+F
Sbjct: 5   PKKRWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQRRKSERKF 64

Query: 87  FPGYVLVEMIMDDESWHLVKHTNKVTGFVGGAKNRPAPISQKEVEDIVSQMQQGTEKPRH 146
           FPGYVLV+MIM+DESWHLV+   +V GF+GG  +RPAPI+ KE + I++++++ +E PR 
Sbjct: 65  FPGYVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRPAPITDKEADAILNRLEKASEAPRP 124

Query: 147 KVEFTVGEFVRVKEGPFTDFNGTVEEVNYEKSKVSVSVMIFGRATPVELEFSQVEK 202
           K  F  GE VRV +GPF DFNGTVEEV+YEKS++ VSV IFGRATPVELEF QVEK
Sbjct: 125 KTMFEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQVEK 180