Pairwise Alignments

Query, 344 a.a., Inner membrane protein YbhQ from Variovorax sp. SCN45

Subject, 314 a.a., Predicted integral membrane protein from Pseudomonas stutzeri RCH2

 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 82/300 (27%), Positives = 125/300 (41%), Gaps = 17/300 (5%)

Query: 30  ALPLFGIAVL---GLLLSH-AHKIDWAGAWQALQRYSP----LLLLSVLGLATASHMLYG 81
           A  L GI+ +   G LL H    I  A    +L    P    L  LS LG    +++   
Sbjct: 7   AWTLIGISAVLLSGYLLYHEVRNISLAELTDSLHAIVPVGWLLAALSTLG----AYVALA 62

Query: 82  CFDLIGKRHLQHRLPYWRTWAIAVTSYAFNLNLG-SLVGGIAMRARLYARAGLDDATVAQ 140
            +D I   HL  R+ +W     + T+YA   N+G S+  G  +R R Y   GL    +  
Sbjct: 63  WYDRIAVAHLGKRISWWFIALCSFTTYALAHNIGASVFSGALVRYRAYRSKGLTPQEIGI 122

Query: 141 IVGLSLATNWLGYGLLAGGLFAAGAIVPPSQAHVGAGTLRLLGVAMILLALAYVAACAFA 200
           ++     T  LG  L AG +      +     H         G  +++L   YV   A+ 
Sbjct: 123 LIVFCSLTFALGVLLTAGVVLILKPQLLDRIVHSARWVSFAAGSGLLVLIALYVFG-AWR 181

Query: 201 RGREWRFRGRRLQLPAARLAVVQLALSTTNWALMGAAMYLLL-GQKVP-YATTMGVLLAA 258
           +   WR     ++ P   +   QL           A +Y  L  +  P Y T +GV LA+
Sbjct: 182 QLAPWRLGKWHIEYPRLPIVGRQLLAGPLELLCAAAIIYFALPAENNPGYLTILGVFLAS 241

Query: 259 SIVGVLTPIPAGLGVLEAVYLALLSGTVKQGALMGAVLAYRALYYLLPLAGGLALYLFLE 318
             + +L+  P GLGVLE  +LA L   +    ++ A++ +R  Y LLP A  + + L  E
Sbjct: 242 FSLALLSHAPGGLGVLELTFLAALP-ELPTVDVLAALIVFRGFYLLLPFALAILIVLAFE 300