Pairwise Alignments

Query, 344 a.a., Inner membrane protein YbhQ from Variovorax sp. SCN45

Subject, 847 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 97.4 bits (241), Expect = 1e-24
 Identities = 92/321 (28%), Positives = 143/321 (44%), Gaps = 17/321 (5%)

Query: 31  LPLFGIAVLGLLLSHAHKIDWAGAWQALQRYSPLLLLSVLGLATASHMLYGCFDLIGKRH 90
           + LFG A+  L     +  D   A     R S    +   GL+  +   Y   D+    +
Sbjct: 39  IALFGAAIFHLTAEVRYD-DVVSALADTSRRSVATAILFTGLSFLALTFY---DVSALDY 94

Query: 91  LQHRLPYWRTWAIAVTSYAFN--LNLGSLVGGIAMRARLYARAGLDDATVAQIVGLSLAT 148
           ++ +LPY      A  +YA       G L GG A+R R Y+R GL    +A+++      
Sbjct: 95  IERKLPYPAVALTAACAYAVGNTAGFGPLSGG-AIRYRSYSRLGLKPEEIARLIAFVTLA 153

Query: 149 NWLGYGLLAG-GLFAAGAIVPPSQAHVGAGTLRLLGVAMILLALAYVAACAFARGREWRF 207
             LG  ++    L A G  V P     G     L  +A+ +LA   V   A   GRE R 
Sbjct: 154 FGLGLAVVTCLSLLAVGEYVAPL---TGIDAAWLRAIAVFVLAGLLVVLIAARSGREVRI 210

Query: 208 RGRRLQLPAARLAVVQLALSTTNWALMGAAMYLLL-GQKVPYATTMGVLLAASIVGVLTP 266
               L+LP ++    Q  ++  + A     +Y+LL    V +   + +   A  +GVL+ 
Sbjct: 211 GRLVLRLPDSQTCSRQFLVTALDLAASATVLYVLLPAGTVGWPAFLAIYAVAVGLGVLSH 270

Query: 267 IPAGLGVLEAVYLALLSGTVKQGALMGAVLAYRALYYLLPLAGGLALYLFLE-RYASSH- 324
           +PAGLGV EAV +A L       A++GA++ YR +Y+LLPL   + + + +E R  + H 
Sbjct: 271 VPAGLGVFEAVIVASLGRAAGVDAVLGALVLYRVIYHLLPLLIAIVVMIGIELRQLAGHP 330

Query: 325 ---SAEETSGDITPPLPTPVA 342
              S     G +TP L   +A
Sbjct: 331 AASSLRRAGGRMTPLLLATLA 351