Pairwise Alignments

Query, 763 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

 Score =  118 bits (296), Expect = 1e-30
 Identities = 82/267 (30%), Positives = 131/267 (49%), Gaps = 12/267 (4%)

Query: 418 RDEVARKTHTLNAALEQAEHQAREQTRLMAYVTHDLRAPLATIIGHVRLLRDEMPQPPDR 477
           RD   RK H      E  E  +R++T  ++ ++H+LR PL  I+G  R+L D       R
Sbjct: 264 RDITERKRHE-----ESLEKASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQR 318

Query: 478 --LQAIERSAAYQLSLIDDLLDYAKGELLPFSFEPRPARLQALLDDIAQYADTLAQRRNN 535
             LQ I  SA    ++ +D++D  K +       P     +  + +I   A  +A+++  
Sbjct: 319 KHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAALMAEQKGL 378

Query: 536 AFELEVQGALPRAVLIDSKRFHQLLLNLLSNAAKFTHGGKIGLRVRARPRAESWRLQFEV 595
            F+LE    LP  V +DS R  Q+L NLLSNA KFT  G + + V A   A+   +  EV
Sbjct: 379 RFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVSAECDAQHAEITIEV 438

Query: 596 WDSGAGIDLKEQARIRQAF-----AENAPSASGNGLGLVIARRIVQRMGGRLLLMSHPNL 650
            D+G GI   EQ +I   +      ++   A G G+GL ++R++++ MGG + + S    
Sbjct: 439 EDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDISVNSEEGF 498

Query: 651 GTRVRFSVIVKDAPEEPRSVAPQAPSS 677
           G+    ++ V    E P  + PQ P +
Sbjct: 499 GSTFTVTIRVPLLAEAPIEIEPQEPQT 525