Pairwise Alignments

Query, 763 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 917 a.a., sensory histidine kinase from Sinorhizobium meliloti 1021

 Score =  116 bits (291), Expect = 5e-30
 Identities = 94/289 (32%), Positives = 134/289 (46%), Gaps = 15/289 (5%)

Query: 428 LNAALEQAEHQAREQTRLMAYVTHDLRAPLATIIGHVRLLRDEMPQPPDR-----LQAIE 482
           L  A   AE     ++R +A ++H+LR PL  IIG+  +L +E     D      L  I 
Sbjct: 407 LERAKSHAESANEAKSRFLASMSHELRTPLNAIIGYSEMLIEEARDHEDEELVPDLDKIA 466

Query: 483 RSAAYQLSLIDDLLDYAKGELLPFSFEPRPARLQALLDDIAQYADTLAQRRNNAFELEVQ 542
            +  + LSLI+D+LD +K E            +  LL D+A     L  R  N F  + +
Sbjct: 467 SAGRHLLSLINDILDLSKIEANKMEVFLETFSVADLLRDVAATVAPLMARNGNEFTQDFE 526

Query: 543 GALPRAVLIDSKRFHQLLLNLLSNAAKFTHGGKIGLRVRARPRAESWRLQFEVWDSGAGI 602
             L   +  D  +  Q L NLLSNAAKFT+GG++ LRVR   R +   L F+V D+G G+
Sbjct: 527 ADLGE-MHSDQTKLRQNLFNLLSNAAKFTNGGRVTLRVRREQRPDRDWLVFQVTDTGIGM 585

Query: 603 DLKEQARIRQAFAENAPSAS----GNGLGLVIARRIVQRMGGRLLLMSHPNLGTRVRFSV 658
             ++Q R+  AF +   S +    G GLGL I R   + +GG + + S    G     SV
Sbjct: 586 SPEQQERLFNAFTQADASTTRNYGGTGLGLSITRSFCRMIGGVVTVESEVGKG-----SV 640

Query: 659 IVKDAPEEPRSVAPQAPSSPPLQSPRLRLRRPPTPVPAIAPLPAAARAE 707
              + P +    A  +P+ P  Q    R        PA   L A A AE
Sbjct: 641 FTMEVPAQCEREADGSPAEPVPQVGSGRTALIIDDEPAARSLIAKALAE 689



 Score = 26.2 bits (56), Expect = 0.008
 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)

Query: 404 RTLVLWQ--AEEQQRLRDEVARKTHTLNAALE 433
           RTL L++  A E+++L DE  R+  T+ AALE
Sbjct: 260 RTLSLFRESAIEKKKLEDEAERQRRTIAAALE 291