Pairwise Alignments

Query, 708 a.a., Type I secretion system ATPase, LssB family LapB from Variovorax sp. SCN45

Subject, 599 a.a., lipid A export ATP-binding/permease protein MsbA from Phaeobacter inhibens DSM 17395

 Score =  196 bits (499), Expect = 2e-54
 Identities = 138/456 (30%), Positives = 239/456 (52%), Gaps = 12/456 (2%)

Query: 254 TGSFIAQVR-EVEQVRELLTSTTIGAVADLPFFLLFVVVLWMVAGPLAWVALAAVPLLVI 312
           TG  ++++  +   ++ +L S+   A+ ++  F+  +V++ + +  L  + L  VP +++
Sbjct: 130 TGEVLSRITTDTTLIQSVLGSSVSIALRNMLIFIGGLVLMLLTSAKLTSLVLLIVPAVIV 189

Query: 313 PGLLVQKPLARLANEGMRESALRNALLVEAVEGIEDIKLMRAEPRFQNQWNHANDVAASV 372
           P L++ + L +++ E     A  +    EA+  ++ ++    E   +++++   + A  V
Sbjct: 190 PILVLGRRLRKISRENQDWIAASSGNAGEALGAVQTVQAYTHEVASRSEFSRLTETAFDV 249

Query: 373 SMRQ----RFLTGLLMTWTQEVQGIVYAVVLLAGCFLVMKGEMTTGALVGSSILASRMIS 428
           SMR+     FLT +++       G+V   VL  G   V  G M+ G LV   I A  +  
Sbjct: 250 SMRRIQTRAFLTVIVIFLV--FSGVVG--VLWMGANDVRAGIMSEGTLVQFVIYAVLVAG 305

Query: 429 PLAQLSGVFARWQQAKVARTGLDQLMQRPVDQPE--HARRVHVPALHGNYALTNAEFRYG 486
            +A LS +++  Q+A  A   L +L+   VDQ +  +A R     + G     +  FRY 
Sbjct: 306 SVAALSEIWSELQRAAGATERLVELLTA-VDQVQDPYAPRALAAPVRGEIRFDDVSFRYP 364

Query: 487 KDDKAPALSVAQLQVKAGEKVALLGRMGAGKSTLLQLMAGLHAPQRGHVSLDALDLRLID 546
              + PAL    L V+ GE VA +G  GAGK+T++Q++   + P  G V LD   LR + 
Sbjct: 365 ARPQIPALVDVSLTVQPGETVAFVGPSGAGKTTIIQMIQRFYDPTSGAVCLDGRPLRDLQ 424

Query: 547 PADLRRDMGLLTQNARLFHGSIRENVTLGMPMATDTQVLEAIAMAGALPFVHSRAEGLDD 606
             D R+ + L+ Q+  +F  S R+N+  G P A+D +V  A   A A  F+ +  EG D 
Sbjct: 425 RDDFRQHIALVPQDPVIFALSARDNIRFGRPGASDAEVEAAARAAAAHDFISALPEGYDS 484

Query: 607 LIHEGGLGLSGGQRQALLLARTLIRQPSIVLLDEPTAHFDEVTERQVIDAVGRWLAPRTL 666
            + E G+ LSGGQ+Q + +AR ++R   ++LLDE T+  D  +ER V  AV      RT 
Sbjct: 485 QVGERGVMLSGGQKQRIAIARAILRDAPVLLLDEATSALDAESERLVQAAVDELSQGRTT 544

Query: 667 VVATHRMPVLQWVDRIVVLEGGRIVMDGSKDQILGK 702
           ++  HR+  ++  DRIVV+E GRI+  G+ DQ++ +
Sbjct: 545 LIVAHRLATVKKADRIVVMEEGRIIATGTHDQLVAE 580