Pairwise Alignments

Query, 418 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  226 bits (576), Expect = 1e-63
 Identities = 148/437 (33%), Positives = 227/437 (51%), Gaps = 70/437 (16%)

Query: 46  ASLVVWIVAAMLAALLAWAWFFKLDEVSTGTGKVVPSSREQMIQSLEGGILVDLKVREGD 105
           A +++W++ A     +AWA + ++D+V+ G GKVVPSS+ Q+IQ+LEGG++  + VREG+
Sbjct: 50  ARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGE 109

Query: 106 IVSAGQVLAQLDRTKTESTVQESASRVRAALAMSARLTAEVNG----------------- 148
            V  GQ L  LD T+  S  +E   +V    A   +L+A ++                  
Sbjct: 110 QVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQ 169

Query: 149 ---TPLVFPDEVR-GEPGLVRTETALYQSRREQLASSLAGVNQALV-------------- 190
              + L FP  +   +P LV  +   Y+   + L + L+ ++Q +               
Sbjct: 170 LDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARII 229

Query: 191 -------LMRRELALTEPLVSRGAASDVEVLRLKRQINEA-------ETKAADLRS---- 232
                    ++EL +TEPL + G    +E+L+L+RQ+N+        E K   L+S    
Sbjct: 230 NLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVRE 289

Query: 233 ----------QYYVKAREDLAKANAEIEAQRSVTRGRSDSLTRLTFASPVRGIVKDIVVT 282
                     ++  + ++ L +A  ++ +      G  D + R    SPV G VK + V 
Sbjct: 290 AMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYVN 349

Query: 283 TVGGVLPPGGKLMEIVPLDEKLLVEARISPRDVAFIHPGQDATVKVTAYDYAIYGGLPGK 342
           TVGGV+ PG  ++EIVP ++ LLVEA+I+P+D+ F+ P   A VK +AYD+  YGGL G 
Sbjct: 350 TVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEGT 409

Query: 343 VTTISPDTIQDDVKRDVYYYRVYIR-TDADHLKNRSGRSFPIVPGMIATVDIHTGSKTVL 401
           +  IS DT QD+     Y  RV  + T   H +N      PI+PGM A+VDI TG +TVL
Sbjct: 410 LEHISADTTQDEEGNSFYLVRVRTKETTLGHDQN-----LPIIPGMTASVDIITGKRTVL 464

Query: 402 DYLIKP-LNKASEALRE 417
           DYL+KP L+  S ALRE
Sbjct: 465 DYLLKPILSAQSNALRE 481