Pairwise Alignments

Query, 418 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 439 a.a., HlyD family protein secretion protein from Sinorhizobium meliloti 1021

 Score =  144 bits (364), Expect = 4e-39
 Identities = 125/416 (30%), Positives = 189/416 (45%), Gaps = 53/416 (12%)

Query: 52  IVAAMLAALLAWAWFFKLDEVSTGTGKVVPSSREQMIQSLEGGILVDLKVREGDIVSAGQ 111
           +  A++A +  WA   +L       G V+     + +Q L GGI+ +L V+EGD V AGQ
Sbjct: 26  LALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLTGGIVGELLVKEGDRVEAGQ 85

Query: 112 VLAQLDRTKTESTVQESASRVRAALAMSARLTAEVNGTPLVFPDEVRGE--PG-----LV 164
           VL +LD T   + +    S +    A  ARL AE  G      +E   E  PG     L+
Sbjct: 86  VLIRLDGTTVRANLAIIESTLAQFYARRARLQAERMGAASFEIEEDLAEFIPGTAAAKLI 145

Query: 165 RTETALYQSRRE--------------QLASSLAG-------VNQALVLMRRELALTEPLV 203
             E  L+ SRR               QLA  + G       + +AL L+  EL   + L 
Sbjct: 146 EGEQRLFASRRSALSGMKGQLDSRKAQLADEVEGLTVQLNAIEEALKLIAEELTGVDSLF 205

Query: 204 SRGAASDVEVLRLKRQINEAE----------------TKAADLRS-QYYVKAREDLAKAN 246
            +G      V  LKRQ  E E                +   DL+  Q     R +++K  
Sbjct: 206 GQGLVPMQRVTTLKRQRAELEGGRGRHIAARAQARGKSSEIDLQILQLDEDRRSEISKEL 265

Query: 247 AEIEAQRSVTRGR----SDSLTRLTFASPVRGIVKDIVVTTVGGVLPPGGKLMEIVPLDE 302
            ++EA+ +    R    +D L RL   +P+ G +  + + TV GV+ PG  LM +VP  E
Sbjct: 266 TDVEAKIAEYEERRTAATDQLRRLDITAPLSGRIYQLAIHTVNGVINPGETLMLVVPEAE 325

Query: 303 KLLVEARISPRDVAFIHPGQDATVKVTAYDYAIYGGLPGKVTTISPDTIQDDVKRDVYYY 362
            L VEA+++  D+  I  GQ   ++ +A++      +  +V T++PD + D+ +    YY
Sbjct: 326 DLTVEAKVATHDIDQIRVGQSVEIRFSAFNQRTTPEVEAEVVTVAPDLVTDE-RTGASYY 384

Query: 363 RVYIRTDADHLKNRSGRSFPIVPGMIATVDIHTGSKTVLDYLIKPL-NKASEALRE 417
            + IR  A+ L    G S  + PGM A V I    +TV+ YL KPL ++   A RE
Sbjct: 385 PLRIRPKAESLAKLKGLS--LYPGMPAEVFIKIADRTVISYLTKPLTDQMRHAFRE 438